ggKbase home page

ar4r2_scaffold_1697

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1697_1
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115..348
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUX5_9BURK
Tellurium resistance protein TerE {ECO:0000313|EMBL:EZP36673.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jant
tellurium resistance protein
ar4r2_scaffold_1697_2
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

348..1454
DNA (1107bp) protein (369aa)
hypothetical protein n=2 Tax=Thiothrix flexilis RepID=UPI00036AD485 rbh
Uncharacterized protein {ECO:0000313|EMBL:EMI08277.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. L
hypothetical protein
ar4r2_scaffold_1697_3
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1451..2185
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI000362060A
putative trehalose 6-phosphatase
Putative trehalose 6-phosphatase {ECO:0000313|EMBL:AJX13768.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhold
ar4r2_scaffold_1697_4
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2182..3255
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00037FB4D6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO54471.1}; TaxID=223283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syring
ar4r2_scaffold_1697_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3252..4199
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036CCB74 rbh
ATP synthase {ECO:0000313|EMBL:KFD73986.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
ar4r2_scaffold_1697_6
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4196..4906
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI00028912B9 rbh
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG84481.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
ar4r2_scaffold_1697_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5965..6282)
DNA (318bp) protein (106aa)
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXW4_9GAMM
Histone family protein nucleoid-structuring protein H-NS {ECO:0000313|EMBL:EIJ36207.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;"
histone family protein nucleoid-structuring protein H-NS
ar4r2_scaffold_1697_8
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6535..8751
DNA (2217bp) protein (739aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00037DC5B4
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:EXF43461.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
N-6 DNA methylase
ar4r2_scaffold_1697_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8751..10034
DNA (1284bp) protein (428aa)
Type I restriction-modification system, S subunit n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG57_PSEU5 rbh
type I restriction-modification system subunit S rbh
Type I restriction-modification system, S subunit {ECO:0000313|EMBL:ABP77958.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
ar4r2_scaffold_1697_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10021..11688
DNA (1668bp) protein (556aa)
ATPase n=1 Tax=Pseudomonas aeruginosa VRFPA01 RepID=V4R2E2_PSEAI rbh
ATPase {ECO:0000313|EMBL:KFF31926.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
ATPase
ar4r2_scaffold_1697_11
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11778..14951
DNA (3174bp) protein (1058aa)
DEAD/DEAH box helicase; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein n=1 Tax=Vibrio splendidus RepID=UPI0003115AC2
hypothetical protein
ar4r2_scaffold_1697_12
unknown

Not on your lists

comp(15153..15401)
DNA (249bp) protein (83aa)

This feature has no annotations

ar4r2_scaffold_1697_13
unknown

Not on your lists

comp(16335..16553)
DNA (219bp) protein (73aa)

This feature has no annotations

ar4r2_scaffold_1697_14
Serratia sp. ATCC 39006, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17179..18063
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3TXH7_9ENTR
Integrase catalytic domain, putative
Uncharacterized protein {ECO:0000313|EMBL:ESN65315.1}; TaxID=104623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. ATCC
ar4r2_scaffold_1697_15

Not on your lists

18600..19874
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D4K6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD81529.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
repB; putative replication initiator protein
ar4r2_scaffold_1697_16
unknown

Not on your lists

19965..20234
DNA (270bp) protein (90aa)

This feature has no annotations

ar4r2_scaffold_1697_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20296..21432
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWJ1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ35734.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_1697_18
unknown

Not on your lists

comp(21824..22093)
DNA (270bp) protein (90aa)

This feature has no annotations

ar4r2_scaffold_1697_19
unknown

Not on your lists

22790..23038
DNA (249bp) protein (83aa)

This feature has no annotations

ar4r2_scaffold_1697_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22937..23680)
DNA (744bp) protein (248aa)
DNA replication protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2L8_9PROT rbh
DNA replication protein rbh
DNA replication protein {ECO:0000313|EMBL:BAN34922.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
ar4r2_scaffold_1697_21
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23670..25169)
DNA (1500bp) protein (500aa)
Transposase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QP44_AZOSU rbh
transposase rbh
Transposase {ECO:0000313|EMBL:AEV25897.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (st
ar4r2_scaffold_1697_22

Not on your lists

comp(25229..25489)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=root RepID=E6QNP5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI08866.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
ar4r2_scaffold_1697_23
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26136..26765
DNA (630bp) protein (210aa)
ParA n=1 Tax=Singularimonas variicoloris RepID=UPI000370F3FB
Cobyrinic acid a,c-diamide synthase/plasmid partitioning family protein ParA/MinD {ECO:0000313|EMBL:GAN82253.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
ATPases involved in chromosome partitioning
ar4r2_scaffold_1697_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26762..27007
DNA (246bp) protein (82aa)
Conserved hypothetical n=1 Tax=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) RepID=C4K5C9_HAMD5
Klebsiella pneumoniae SB3193 genomic scaffold, KpST82scacor00002 {ECO:0000313|EMBL:CDQ52077.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
hypothetical protein
ar4r2_scaffold_1697_25
unknown

Not on your lists

comp(27740..27910)
DNA (171bp) protein (57aa)

This feature has no annotations

ar4r2_scaffold_1697_26
unknown

Not on your lists

comp(28102..28350)
DNA (249bp) protein (83aa)

This feature has no annotations

ar4r2_scaffold_1697_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29583..30041)
DNA (459bp) protein (153aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV70_9GAMM
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EIJ35263.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thio
ar4r2_scaffold_1697_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30038..30229)
DNA (192bp) protein (64aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV69_9GAMM
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:EIJ35262.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
Displaying 28 items

View Taxonomy