ggKbase home page

ar4r2_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_170_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150..815
DNA (666bp) protein (222aa)
DNA replication and repair protein RadC n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN87_9GAMM
DNA replication and repair protein RadC {ECO:0000313|EMBL:EIJ32830.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothri
hypothetical protein
ar4r2_scaffold_170_2
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1124..1447)
DNA (324bp) protein (108aa)
Plasmid stabilization system n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R3I1_XYLFS
DNA damage inducible protein yafQ
DNA damage inducible protein yafQ {ECO:0000313|EMBL:CBW76732.1}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhold
ar4r2_scaffold_170_3

Not on your lists

comp(1428..1688)
DNA (261bp) protein (87aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=mine drainage metagenome RepID=T1BYQ5_9ZZZZ
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EQD74857.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RelB/DinJ family Addiction module antitoxin
ar4r2_scaffold_170_4
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2081..3448)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RTK4_SYNP3
Uncharacterized protein {ECO:0000313|EMBL:KIA89589.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
ar4r2_scaffold_170_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3612..6401)
DNA (2790bp) protein (930aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfurit
helicase IV
Helicase IV id=4349178 bin=GWF2_Lentisphaerae_57_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
ar4r2_scaffold_170_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6541..6798)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3C091_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ37034.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
ar4r2_scaffold_170_7
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6887..7468)
DNA (582bp) protein (194aa)
polC; DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1I0_AZOSB
Tax=BJP_IG2103_Rhodocyclales_63_50
ar4r2_scaffold_170_8
unknown

Not on your lists

comp(7465..7587)
DNA (123bp) protein (41aa)

This feature has no annotations

ar4r2_scaffold_170_9
unknown

Not on your lists

comp(7612..8514)
DNA (903bp) protein (301aa)

This feature has no annotations

ar4r2_scaffold_170_10
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8502..10751)
DNA (2250bp) protein (750aa)
Piwi domain protein {ECO:0000313|EMBL:CEN45192.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsu
Piwi domain protein id=4844727 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
Piwi domain-containing protein
ar4r2_scaffold_170_11
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10816..11049)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Acinetobacter junii CIP 64.5 RepID=N9CE17_ACIJU
Uncharacterized protein {ECO:0000313|EMBL:ENV66720.1}; TaxID=1217664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter juni
hypothetical protein
ar4r2_scaffold_170_12
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11438..14719
DNA (3282bp) protein (1094aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T7RA08_ECOLX
putative uncharacterized protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
ar4r2_scaffold_170_13
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14785..15102
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00035E1220
Transposase {ECO:0000313|EMBL:KHD33287.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;
IS3 ORF1
ar4r2_scaffold_170_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15099..15959
DNA (861bp) protein (287aa)
Integrase catalytic region n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BS85_9GAMM rbh
Integrase catalytic region {ECO:0000313|EMBL:EIJ34228.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5
ISCja1, transposase orfB
ar4r2_scaffold_170_15
unknown

Not on your lists

16098..17252
DNA (1155bp) protein (385aa)

This feature has no annotations

ar4r2_scaffold_170_16
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17292..20963)
DNA (3672bp) protein (1224aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y8J4_9DELT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBX26888.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmen
SMC domain-containing protein
ar4r2_scaffold_170_17
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20967..22187)
DNA (1221bp) protein (407aa)
Possible exonuclease n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MA98_BORPB rbh
exonuclease
Possible exonuclease {ECO:0000313|EMBL:CCJ47869.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis
ar4r2_scaffold_170_18
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22202..24244)
DNA (2043bp) protein (681aa)
Peptidase n=1 Tax=Marinobacter sp. EVN1 RepID=U7NNY4_9ALTE rbh
Peptidase {ECO:0000313|EMBL:ERS84090.1}; TaxID=1397532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EVN1.;"
putative ATP-dependent protease
ar4r2_scaffold_170_19
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24244..26589)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA023 RepID=U8R1R1_PSEAI rbh
Alkaline phosphatase {ECO:0000313|EMBL:KGO34781.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp
PglZ domain protein
ar4r2_scaffold_170_20
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26586..27821)
DNA (1236bp) protein (412aa)
Putative transcriptional regulator n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SDN9_PELPB rbh
Transcriptional regulator {ECO:0000313|EMBL:KJR96640.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium
transcriptional regulator
ar4r2_scaffold_170_21
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27830..30529)
DNA (2700bp) protein (900aa)
DNA repair ATPase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2ND05_DESAR rbh
DNA repair ATPase
DNA repair ATPase {ECO:0000313|EMBL:AEB09579.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxida
ar4r2_scaffold_170_22
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30522..33920)
DNA (3399bp) protein (1133aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI000366D12E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADC71642.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
ar4r2_scaffold_170_23
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33948..37385)
DNA (3438bp) protein (1146aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. EVN1 RepID=U7NZ94_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS33128.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
hypothetical protein
ar4r2_scaffold_170_24
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37400..37951)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. EVN1 RepID=U7P0Y7_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:ERS88601.1}; TaxID=1397532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
hypothetical protein
ar4r2_scaffold_170_25
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37938..38726)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. EVN1 RepID=U7P1U6_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:ERS88600.1}; TaxID=1397532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
hypothetical protein
ar4r2_scaffold_170_26
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38743..39708)
DNA (966bp) protein (322aa)
TIR n=2 Tax=Nitrosococcus oceani RepID=Q3JF60_NITOC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI17757.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C
ar4r2_scaffold_170_27
Plesiomonas shigelloides, Plesiomonas, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39810..40583)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AVZ9_PLESH
Uncharacterized protein {ECO:0000313|EMBL:EON90476.1}; TaxID=1315976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Plesiomonas.;" source="Plesiomonas s
ar4r2_scaffold_170_28
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40719..41237)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003609531
Uncharacterized protein {ECO:0000313|EMBL:KGQ20588.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
hypothetical protein
ar4r2_scaffold_170_29
unknown

Not on your lists

41269..41466
DNA (198bp) protein (66aa)

This feature has no annotations

ar4r2_scaffold_170_30
unknown

Not on your lists

41739..42113
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

View Taxonomy