ggKbase home page

ar4r2_scaffold_1320

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1320_1
ACD80, SR1, Bacteria

Not on your lists

comp(348..728)
DNA (381bp) protein (127aa)
hypothetical protein
transmembrane_regions 5..27 id=132366 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
transmembrane_regions 5..27 Tax=ACD80
ar4r2_scaffold_1320_2
ACD80, SR1, Bacteria

Not on your lists

comp(747..1403)
DNA (657bp) protein (219aa)
hypothetical protein
transmembrane_regions 15..37 id=132362 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
transmembrane_regions 15..37 Tax=ACD80
ar4r2_scaffold_1320_3
ACD80, SR1, Bacteria

Not on your lists

comp(1469..1879)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYF0_9BACT
coiled-coil 63..105 Tax=ACD80
hypothetical protein
ar4r2_scaffold_1320_4
ACD80, SR1, Bacteria

Not on your lists

comp(1907..2095)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00035F2380
coiled-coil 42..63 Tax=ACD80
ar4r2_scaffold_1320_5
ACD80, SR1, Bacteria

Not on your lists

comp(2183..3253)
DNA (1071bp) protein (357aa)
pilus retraction protein PilT; K02669 twitching motility protein PilT id=132369 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=ACD80
Twitching motility protein
ar4r2_scaffold_1320_6

Not on your lists

3569..5047
DNA (1479bp) protein (493aa)
cell envelope-related transcriptional attenuator id=983477 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
cell envelope-related transcriptional attenuator
Putative transcription regulator {ECO:0000313|EMBL:EKD65986.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1320_7
ACD80, SR1, Bacteria

Not on your lists

5138..5869
DNA (732bp) protein (244aa)
rnc; ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] id=132368 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
rnc; ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] Tax=ACD80
hypothetical protein
ar4r2_scaffold_1320_8
ACD80, SR1, Bacteria

Not on your lists

5937..6905
DNA (969bp) protein (323aa)
Protein translocase subunit secF n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001743759 id=983486 bin=RAAC1_SR1 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=RAAC1_SR1 organism_group=SR1 rbh
Protein translocase subunit secF
transmembrane_regions 12..31 Tax=ACD80
ar4r2_scaffold_1320_9
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

7050..7772
DNA (723bp) protein (241aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=983489 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
hypothetical protein
ribosomal large subunit pseudouridine synthase D Tax=GWD1_Spirochaetes_27_9_curated
ar4r2_scaffold_1320_10

Not on your lists

7852..9507
DNA (1656bp) protein (552aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJ73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44473.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1320_11

Not on your lists

9639..10340
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4J2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44472.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1320_12

Not on your lists

10851..11162
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z5B3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44471.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1320_13
unknown

Not on your lists

11180..12280
DNA (1101bp) protein (367aa)
UPI0003CFBCF8 related cluster n=1 Tax=unknown RepID=UPI0003CFBCF8 rbh
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase n=2 Tax=Clostridium butyricum RepID=B1QXC5_CLOBU Tax=ACD49
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
ar4r2_scaffold_1320_14
RAAC1_SR1, RAAC1_SR1, RAAC1_SR1, RAAC1_SR1, SR1, Bacteria

Not on your lists

12803..15355
DNA (2553bp) protein (851aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI0003648771
hypothetical protein
transmembrane_regions 5..22 id=983500 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_1320_15
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

Not on your lists

15592..15978
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI00035D80BF
S23 ribosomal protein {ECO:0000313|EMBL:KKQ42826.1}; TaxID=1618948 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
hypothetical protein
ar4r2_scaffold_1320_16
RAAC1_SR1, RAAC1_SR1, RAAC1_SR1, RAAC1_SR1, SR1, Bacteria

Not on your lists

16126..17088
DNA (963bp) protein (321aa)
hypothetical protein
source missing description 14..286 id=983501 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
source missing description 14..286 id=983501 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_1320_17
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17211..18950
DNA (1740bp) protein (580aa)
UPI0003CFA893 related cluster n=1 Tax=unknown RepID=UPI0003CFA893
hypothetical protein
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
ar4r2_scaffold_1320_18
unknown

Not on your lists

comp(19408..19878)
DNA (471bp) protein (157aa)

This feature has no annotations

ar4r2_scaffold_1320_19
ACD80, SR1, Bacteria

Not on your lists

19990..23382
DNA (3393bp) protein (1131aa)
hypothetical protein
seg 342..355 id=983509 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
seg 33..44 Tax=ACD80
ar4r2_scaffold_1320_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(23513..23899)
DNA (387bp) protein (129aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=5094054 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
ar4r2_scaffold_1320_21
ACD80, SR1, Bacteria

Not on your lists

comp(23908..24627)
DNA (720bp) protein (240aa)
PROKAR_LIPOPROTEIN id=132056 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
PROKAR_LIPOPROTEIN Tax=ACD80
ar4r2_scaffold_1320_22
ACD80, SR1, Bacteria

Not on your lists

comp(24627..25583)
DNA (957bp) protein (319aa)
seg 30..44 id=132059 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
seg 30..44 Tax=ACD80
ar4r2_scaffold_1320_23
unknown

Not on your lists

comp(26280..27341)
DNA (1062bp) protein (354aa)
Chaperone protein DnaJ n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA9_9EURY id=132079 bin=ACD80 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD80 organism_group=SR1 rbh
Chaperone protein DnaJ n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA9_9EURY Tax=ACD80
Chaperone protein DnaJ
ar4r2_scaffold_1320_24
unknown

Not on your lists

comp(27383..27535)
DNA (153bp) protein (51aa)

This feature has no annotations

ar4r2_scaffold_1320_25
unknown

Not on your lists

27819..28277
DNA (459bp) protein (153aa)

This feature has no annotations

ar4r2_scaffold_1320_26
unknown

Not on your lists

28301..28441
DNA (141bp) protein (47aa)

This feature has no annotations

ar4r2_scaffold_1320_27
unknown

Not on your lists

28429..30003
DNA (1575bp) protein (525aa)

This feature has no annotations

ar4r2_scaffold_1320_28
unknown

Not on your lists

comp(30072..30746)
DNA (675bp) protein (225aa)

This feature has no annotations

ar4r2_scaffold_1320_29
ACD80, SR1, Bacteria

Not on your lists

31006..31341
DNA (336bp) protein (112aa)
coiled-coil 73..94 Tax=ACD80
coiled-coil 73..94 id=132066 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
ar4r2_scaffold_1320_30
unknown

Not on your lists

31370..33547
DNA (2178bp) protein (726aa)

This feature has no annotations

Displaying 30 items

View Taxonomy