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ar4r2_scaffold_1119

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1119_1
unknown

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comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

ar4r2_scaffold_1119_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(92..727)
DNA (636bp) protein (212aa)
aat; leucyl/phenylalanyl-tRNA-protein transferase (EC:2.3.2.6) Tax=GWE2_Bacteroidetes_40_63_curated
Leucyl/phenylalanyl-tRNA--protein transferase id=4626841 bin=GWC2_Bacteroidetes_40_13 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
leucyl/phenylalanyl-tRNA--protein transferase
ar4r2_scaffold_1119_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(753..2063)
DNA (1311bp) protein (437aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.34) Tax=GWF2_Bacteroidetes_41_31_curated
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.34)
Hydroxymethylglutaryl-CoA reductase id=4161897 bin=GWF2_Bacteroidetes_41_31 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ar4r2_scaffold_1119_4
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2065..3030)
DNA (966bp) protein (322aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:AFM06196.1}; EC=5.3.3.2 {ECO:0000313|EMBL:AFM06196.1};; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AQG1_FLELS
ar4r2_scaffold_1119_5
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3035..4117)
DNA (1083bp) protein (361aa)
menaquinone biosynthesis protein, SCO4550 family Tax=GWA2_Bacteroidetes_31_9b_curated
Menaquinone biosynthesis protein, SCO4550 family id=2249447 bin=GWB2_Bacteroidetes_32_14 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
FO synthase subunit 2
ar4r2_scaffold_1119_6
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4178..5713)
DNA (1536bp) protein (512aa)
Putative uncharacterized protein id=4179414 bin=GWF2_Bacteroidetes_33_38 species=Trypanosoma vivax genus=Trypanosoma taxon_order=Kinetoplastida taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
ar4r2_scaffold_1119_7
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5773..6450)
DNA (678bp) protein (226aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_40_19_curated
UPI000298871B related cluster id=4125868 bin=GWF2_Bacteroidetes_41_31 species=Vibrio parahaemolyticus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
acetyltransferase domain protein
ar4r2_scaffold_1119_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(6465..7382)
DNA (918bp) protein (306aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.7.8.- 2.4.1.83)
Glycosyltransferase id=3960807 bin=GWF2_Bacteroidetes_38_335 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=BJP_IG2103_Bacteroidetes_41_9
ar4r2_scaffold_1119_9
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7393..8130)
DNA (738bp) protein (246aa)
Putative uncharacterized protein id=3764094 bin=GWF2_Bacteroidetes_38_335 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
short-chain dehydrogenase/reductase sdr Tax=GWF2_Bacteroidetes_38_335_curated
3-oxoacyl-ACP reductase
ar4r2_scaffold_1119_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(8111..9199)
DNA (1089bp) protein (363aa)
Beta-ketoacyl-acyl-carrier-protein synthase I id=4125873 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
probable 3-oxoacyl-[acyl carrier protein] synthase
Tax=BJP_IG2103_Bacteroidetes_41_9
ar4r2_scaffold_1119_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(9203..9442)
DNA (240bp) protein (80aa)
Uncharacterized protein id=1902249 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
ar4r2_scaffold_1119_12
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9735..10739)
DNA (1005bp) protein (335aa)
Beta-ketoacyl-acyl-carrier-protein synthase III n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVR6_9FLAO
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KFF16715.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
putative beta-ketoacyl-acyl-carrier protein synthase I
ar4r2_scaffold_1119_13
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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10885..11550
DNA (666bp) protein (222aa)
Transcriptional regulator id=3692076 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
cAMP-binding protein
ar4r2_scaffold_1119_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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11584..12618
DNA (1035bp) protein (345aa)
Sulfotransferase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Sulfotransferase id=3960800 bin=GWF2_Bacteroidetes_38_335 species=Acaryochloris sp. CCMEE 5410 genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
ar4r2_scaffold_1119_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12615..13652
DNA (1038bp) protein (346aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS04812.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Sulfotransferase id=3960800 bin=GWF2_Bacteroidetes_38_335 species=Acaryochloris sp. CCMEE 5410 genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
ar4r2_scaffold_1119_16
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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13729..16347
DNA (2619bp) protein (873aa)
valyL-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=GWA2_Bacteroidetes_31_9_curated
Valine--tRNA ligase id=4122694 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
valyl-tRNA synthetase
ar4r2_scaffold_1119_17
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16436..16900
DNA (465bp) protein (155aa)
ferric uptake regulator, Fur family protein id=4095544 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ferric uptake regulator, Fur family; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=GWF2_Bacteroidetes_33_38_curated
ferric uptake regulator, Fur family
ar4r2_scaffold_1119_18
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16897..18258)
DNA (1362bp) protein (454aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FB039 rbh
histidyl-tRNA synthase
ar4r2_scaffold_1119_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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18495..19157
DNA (663bp) protein (221aa)
Putative uncharacterized protein id=4342198 bin=GWF2_Bacteroidetes_43_63 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
ar4r2_scaffold_1119_20
unknown

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19196..19357
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 20 items

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