ggKbase home page

ar4r2_scaffold_1885

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1885_trna_1
unknown

Not on your lists

comp(235..306)
DNA (72bp)
transferRNA
ar4r2_scaffold_1885_1
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(372..1133)
DNA (762bp) protein (254aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
Putative uncharacterized protein id=3653879 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
ar4r2_scaffold_1885_2
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1143..2660)
DNA (1518bp) protein (506aa)
GH3 auxin-responsive promoter id=3899680 bin=GWF2_Bacteroidetes_38_335 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
GH3 auxin-responsive promoter Tax=GWF2_Bacteroidetes_38_335_curated
GH3 auxin-responsive promoter
ar4r2_scaffold_1885_3
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2832..3179
DNA (348bp) protein (116aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RBG_13_Bacteroidetes_43_22_curated
50S ribosomal protein L19 id=2043170 bin=GWD2_Bacteroidetes_33_33 species=Croceibacter atlanticus genus=Croceibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
ar4r2_scaffold_1885_4
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3240..3935)
DNA (696bp) protein (232aa)
Octanoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=GWA2_Bacteroidetes_31_9b_curated
lipoate-protein ligase B id=1943597 bin=GWE2_Bacteroidetes_32_14 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
Octanoyltransferase
ar4r2_scaffold_1885_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3939..5339)
DNA (1401bp) protein (467aa)
bleomycin hydrolase (EC:3.4.22.40); K01372 bleomycin hydrolase [EC:3.4.22.40] Tax=GWE2_Bacteroidetes_40_63_curated
Bleomycin hydrolase id=3486503 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
biotin transporter BioY
ar4r2_scaffold_1885_6

Not on your lists

comp(5371..6201)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037C6019
Marine sediment metagenome DNA, contig: S01H4_C01813 {ECO:0000313|EMBL:GAG73396.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
lysophospholipase
ar4r2_scaffold_1885_7
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6895..7317)
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bact
Single-stranded DNA-binding protein id=1732729 bin=GWA2_Bacteroidetes_42_15 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
single-strand binding protein
ar4r2_scaffold_1885_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7474..7941
DNA (468bp) protein (156aa)
thiol peroxidase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003086401
thiol peroxidase
Thiol peroxidase {ECO:0000313|EMBL:AKD01839.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
ar4r2_scaffold_1885_9
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7950..8963
DNA (1014bp) protein (338aa)
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=869213 species="Bacteria; Bacteroid
recombinase A id=4406243 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
recombination protein RecA
ar4r2_scaffold_1885_10
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9040..10044
DNA (1005bp) protein (335aa)
Tetratricopeptide repeat protein id=3892716 bin=GWF2_Bacteroidetes_33_38 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
tetratricopeptide repeat protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
ar4r2_scaffold_1885_11
unknown

Not on your lists

10148..10264
DNA (117bp) protein (39aa)

This feature has no annotations

ar4r2_scaffold_1885_12
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10313..11002)
DNA (690bp) protein (230aa)
N-acetylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=GWF2_Bacteroidetes_33_38_curated
CMP-N-acetylneuraminic acid synthetase id=4156440 bin=GWF2_Bacteroidetes_33_38 species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
cytidylyltransferase family protein
ar4r2_scaffold_1885_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11007..12218)
DNA (1212bp) protein (404aa)
Uncharacterized protein id=4662196 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
ar4r2_scaffold_1885_14
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12354..12665)
DNA (312bp) protein (104aa)
Putative DNA-binding protein id=4156452 bin=GWF2_Bacteroidetes_33_38 species=Bacteroides helcogenes genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DNA-binding protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
Displaying 15 items

View Taxonomy