ggKbase home page

ar4r2_scaffold_831

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_831_1
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
penicillin-binding protein 2 (EC:2.4.1.129)
penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=GWA2_Bacteroidetes_30_7_curated
Penicillin-binding protein 2 id=4630412 bin=GWF2_Bacteroidetes_33_38 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ar4r2_scaffold_831_2
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

622..2046
DNA (1425bp) protein (475aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=GWA2_Bacteroidetes_30_7_curated
Rod shape-determining protein RodA id=3278267 bin=GWC2_Bacteroidetes_33_15 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good + rbh
rod shape-determining protein RodA
ar4r2_scaffold_831_3
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2056..3306
DNA (1251bp) protein (417aa)
collagenase; K08303 putative protease [EC:3.4.-.-] Tax=GWF2_Bacteroidetes_33_38_curated
collagenase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003173AC3
collagenase
ar4r2_scaffold_831_4
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3317..3802
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003785BEC
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CEN40986.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capn
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ar4r2_scaffold_831_5
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3907..6366
DNA (2460bp) protein (820aa)
MORN variant repeat protein id=4707650 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
glucosyltransferase-S Tax=GWA2_Bacteroidetes_32_17_curated
MORN repeat-containing protein
ar4r2_scaffold_831_6
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6438..8180
DNA (1743bp) protein (581aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=2301089 bin=GWB2_Bacteroidetes_32_14 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
ar4r2_scaffold_831_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8491..10629
DNA (2139bp) protein (713aa)
Family S9A serine protease; K01322 prolyl oligopeptidase [EC:3.4.21.26] Tax=GWF2_Bacteroidetes_38_335_curated
Family S9A serine protease id=4245188 bin=GWF2_Bacteroidetes_38_335 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
Family S9A serine protease
ar4r2_scaffold_831_8
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(10794..12581)
DNA (1788bp) protein (596aa)
Elongation factor 4 id=4151306 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
GTP-binding protein LepA
Tax=BJP_IG2102_Bacteroidetes_40_9
ar4r2_scaffold_831_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12635..14191)
DNA (1557bp) protein (519aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-] Tax=GWE2_Bacteroidetes_32_14_curated
ribonuclease G id=2144195 bin=GWE2_Bacteroidetes_32_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
ribonuclease, Rne/Rng family
ar4r2_scaffold_831_10
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(14459..14827)
DNA (369bp) protein (123aa)
histone family protein DNA-binding protein id=4377298 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
DNA-binding protein
Tax=BJP_IG2102_Bacteroidetes_40_9
ar4r2_scaffold_831_11
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15037..15882
DNA (846bp) protein (282aa)
Lipoyl synthase id=4921645 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
lipoate synthase Tax=GWA2_Bacteroidetes_32_17_curated
lipoyl synthase
ar4r2_scaffold_831_12
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16020..18803
DNA (2784bp) protein (928aa)
BNR/Asp-box repeat protein id=1915714 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
BNR/Asp-box repeat-containing protein Tax=GWA2_Bacteroidetes_32_17_curated
BNR/Asp-box repeat-containing protein
ar4r2_scaffold_831_13
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19169..20269)
DNA (1101bp) protein (367aa)
cobD2; threonine-phosphate decarboxylase CobD (EC:4.1.1.81)
Aspartate/tyrosine/aromatic aminotransferase id=3727621 bin=GWF2_Bacteroidetes_33_38 species=Caldisphaera lagunensis genus=Caldisphaera taxon_order=Acidilobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
aspartate/tyrosine/aromatic aminotransferase Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_831_14
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20275..20817)
DNA (543bp) protein (181aa)
Colicin V production protein id=3653876 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Colicin V production protein; K03558 membrane protein required for colicin V production Tax=GWF2_Bacteroidetes_33_38_curated
colicin V production protein
ar4r2_scaffold_831_15
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20937..22133
DNA (1197bp) protein (399aa)
Isocitrate/isopropylmalate dehydrogenase id=2933805 bin=GWF2_Bacteroidetes_33_38 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
3-isopropylmalate dehydrogenase Tax=GWF2_Bacteroidetes_33_38_curated
3-isopropylmalate dehydrogenase
ar4r2_scaffold_831_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22205..22759
DNA (555bp) protein (185aa)
Metal dependent phosphohydrolase id=4887658 bin=GWC2_Bacteroidetes_40_13 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
metal dependent phosphohydrolase Tax=GWE2_Bacteroidetes_40_63_curated
metal dependent phosphohydrolase
ar4r2_scaffold_831_17
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22887..23786
DNA (900bp) protein (300aa)
Uncharacterized protein id=4533296 bin=GWF2_Bacteroidetes_33_38 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_831_18
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23934..24401
DNA (468bp) protein (156aa)
Putative uncharacterized protein id=3727524 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
Displaying 18 items

View Taxonomy