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ar4r2_scaffold_1375

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1375_1
R_OD1_Adlerbacteria_54_23, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

3..260
DNA (258bp) protein (86aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Adlerbacteria_54_23_curated
ar4r2_scaffold_1375_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(194..487)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FV33_9BACT
seg 104..113 Tax=ACD4
ar4r2_scaffold_1375_3
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(525..767)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BUS1_9BACT
seg 2..12 Tax=ACD49
ar4r2_scaffold_1375_trna_4
unknown

Not on your lists

comp(935..1008)
DNA (74bp)
transferRNA
ar4r2_scaffold_1375_trna_3
unknown

Not on your lists

comp(1028..1099)
DNA (72bp)
transferRNA
ar4r2_scaffold_1375_trna_2
unknown

Not on your lists

comp(1188..1259)
DNA (72bp)
transferRNA
ar4r2_scaffold_1375_4
unknown

Not on your lists

1397..2668
DNA (1272bp) protein (424aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C66 id=132210 bin=ACD80 species=Methylophilales bacterium HTCC2181 genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD80 organism_group=SR1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C66 Tax=ACD80
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
ar4r2_scaffold_1375_5
unknown

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2771..4240
DNA (1470bp) protein (490aa)

This feature has no annotations

ar4r2_scaffold_1375_6
unknown

Not on your lists

comp(4284..4718)
DNA (435bp) protein (145aa)

This feature has no annotations

ar4r2_scaffold_1375_7

Not on your lists

comp(5154..6362)
DNA (1209bp) protein (403aa)
hypothetical protein; K07133 id=3350 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE15864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_1375_8
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(7040..8449)
DNA (1410bp) protein (470aa)
thx:Thet_2379 FeS assembly protein SufB id=68786 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
lba:Lebu_0493 FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=ACD78
hypothetical protein
ar4r2_scaffold_1375_9
unknown

Not on your lists

comp(8456..9235)
DNA (780bp) protein (260aa)
FeS assembly ATPase SufC n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=D3NIG1_9FIRM id=49519 bin=ACD3 species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
FeS assembly ATPase SufC n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=D3NIG1_9FIRM Tax=ACD3
hypothetical protein
ar4r2_scaffold_1375_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

9520..10461
DNA (942bp) protein (314aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 S-adenosyl-methyltransferase [EC:2.1.1.-] Tax=ACD4
Ribosomal RNA small subunit methyltransferase H n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GSZ3_9BACT rbh
S-adenosyl-methyltransferase
ar4r2_scaffold_1375_11

Not on your lists

10483..10842
DNA (360bp) protein (120aa)
transmembrane_regions 28..50 id=69120 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1375_12
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10864..11295)
DNA (432bp) protein (144aa)
"Winged helix" DNA-binding domain id=33848 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Transcriptional regulator; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
aau; Protein aau3
ar4r2_scaffold_1375_13
unknown

Not on your lists

comp(11283..12458)
DNA (1176bp) protein (392aa)

This feature has no annotations

ar4r2_scaffold_1375_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


12734..16102
DNA (3369bp) protein (1123aa)
tde:TDE2339 leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=124253 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) Tax=CG_GN02-01
leucyl-tRNA synthetase (EC:6.1.1.4)
ar4r2_scaffold_1375_15
ACD49, ACD49, ACD49, ACD49, Gracilibacteria, Bacteria

Not on your lists

16176..16802
DNA (627bp) protein (209aa)
hypothetical protein id=68955 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein id=68955 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ar4r2_scaffold_1375_16
unknown

Not on your lists

comp(16866..17084)
DNA (219bp) protein (73aa)

This feature has no annotations

ar4r2_scaffold_1375_17

Not on your lists

comp(17110..17577)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PIB3_9ZZZZ
Putative uncharacterized protein; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
ar4r2_scaffold_1375_trna_1
unknown

Not on your lists

comp(17715..17796)
DNA (82bp)
transferRNA
ar4r2_scaffold_1375_18
unknown

Not on your lists

17909..18904
DNA (996bp) protein (332aa)
Sortase family protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5X9_9BACT
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB Tax=ACD3
putative sortase
ar4r2_scaffold_1375_19
unknown

Not on your lists

18906..19169
DNA (264bp) protein (88aa)

This feature has no annotations

ar4r2_scaffold_1375_20
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

19276..19716
DNA (441bp) protein (147aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=34427 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
single-strand binding protein
ar4r2_scaffold_1375_21
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(19771..20010)
DNA (240bp) protein (80aa)
hypothetical protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] Tax=ACD4
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FY56_9BACT
ar4r2_scaffold_1375_22
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(20104..20574)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4M4_9BACT
hypothetical protein Tax=ACD49
ar4r2_scaffold_1375_23
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(20585..21037)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P973_9FIRM id=123362 bin=ACD78 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
AP4A hydrolase Tax=ACD78
ar4r2_scaffold_1375_24
ACD3, Gracilibacteria, Bacteria

Not on your lists

21274..23406
DNA (2133bp) protein (711aa)
smf:Smon_0189 translation elongation factor G; K02355 elongation factor EF-G [EC:3.6.5.3] Tax=ACD3
fusA; translation elongation factor G (EC:3.6.5.3)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GSY3_9BACT
Displaying 28 items

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