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ar4r2_scaffold_653

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_653_1
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP67778.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
seg 88..99 id=131223 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
ar4r2_scaffold_653_2
GWF2_OD1_35_54, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(663..1346)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EPP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP84703.1}; TaxID=1618722 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_35_54.;"
ar4r2_scaffold_653_3
unknown

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comp(1454..1867)
DNA (414bp) protein (138aa)

This feature has no annotations

ar4r2_scaffold_653_4
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

1964..2635
DNA (672bp) protein (224aa)
ribonuclease h (EC:3.1.26.4)
Ribonuclease (Fragment) n=1 Tax=uncultured bacterium RepID=K2FIV9_9BACT
Ribonuclease HII Tax=GWE1_OD1_ACD7_35_17
ar4r2_scaffold_653_5

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2818..3036
DNA (219bp) protein (73aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=129688 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpmF; 50S ribosomal protein L32
ar4r2_scaffold_653_6
GWF1_OD1_35_5, Moranbacteria, Parcubacteria, Bacteria

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3065..3580
DNA (516bp) protein (172aa)
N utilization substance protein B homolog n=1 Tax=uncultured bacterium RepID=K2GEA8_9BACT rbh
N utilization substance protein B-like protein {ECO:0000313|EMBL:KKP80818.1}; TaxID=1618716 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_35_5.;"
putative transcription termination factor
ar4r2_scaffold_653_7
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3657..4340
DNA (684bp) protein (228aa)
rnc; ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] id=129686 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
putative ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000313|EMBL:KKP69044.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
ar4r2_scaffold_653_8
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

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4500..5138
DNA (639bp) protein (213aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88) Tax=CG_Falkow_04
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor id=4889284 bin=GWC2_OP3-like_45_7 species=Aerococcus viridans genus=Aerococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
ar4r2_scaffold_653_9
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5142..7055
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZFL0_9BACT rbh
Type I restriction modification system, N-6 DNA methylase Tax=CG_Falkow_04
type I restriction-modification protein subunit M
ar4r2_scaffold_653_10
R_RIF_OD1_12_48_12, RIF-OD1-12, Parcubacteria, Bacteria

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7055..7543
DNA (489bp) protein (163aa)
seg Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated
seg id=5802686 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
ar4r2_scaffold_653_11
R_OP11_Roizmanbacteria_35_13, Roizmannbacteria, Microgenomates, Bacteria

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7710..9074
DNA (1365bp) protein (455aa)
DNA methylase-type I restriction-modification system Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_35_13_curated
DNA METHYLASE-TYPE I RESTRICTION-MODIFICATION SYSTEM id=4838847 bin=GWC2_OD1_43_27 species=Mannheimia haemolytica genus=Mannheimia taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
DNA methylase-type I restriction-modification system
ar4r2_scaffold_653_12
GWE2_OD1_35_164, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9402..11729
DNA (2328bp) protein (776aa)
Chromosome segregation protein SMC n=1 Tax=uncultured bacterium RepID=K2FIV4_9BACT rbh
Chromosome partition protein Smc {ECO:0000313|EMBL:KKP70430.1}; TaxID=1618711 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_35_164.;"
chromosome segregation protein SMC
ar4r2_scaffold_653_13

Not on your lists

11840..12238
DNA (399bp) protein (133aa)
Two component transcriptional regulator, LuxR family n=1 Tax=uncultured bacterium RepID=K2ERB4_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EKE21421.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_653_14
GWF2_OD1_35_54, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12298..14295)
DNA (1998bp) protein (666aa)
multi-sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] id=129689 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:KKP82166.1}; TaxID=1618722 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_35_54.;"
two-component sensor kinase
ar4r2_scaffold_653_15
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

14369..15541
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0DB09_9RHOB id=129682 bin=ACD7 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP69048.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
hypothetical protein
ar4r2_scaffold_653_16
unknown

Not on your lists

15561..15728
DNA (168bp) protein (56aa)

This feature has no annotations

ar4r2_scaffold_653_trna_1
unknown

Not on your lists

comp(15901..15982)
DNA (82bp)
transferRNA
ar4r2_scaffold_653_17
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

16040..16807
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FTA0_9BACT rbh
Chromosome segregation ATPase {ECO:0000313|EMBL:KKP64019.1}; TaxID=1618720 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_34_56.;"
chromosome segregation ATPase
ar4r2_scaffold_653_18

Not on your lists

16895..17836
DNA (942bp) protein (314aa)
ParB-like protein partition protein; K03497 chromosome partitioning protein, ParB family id=130405 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE21023.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ParB-like partition protein
ar4r2_scaffold_653_19

Not on your lists

comp(17874..19367)
DNA (1494bp) protein (498aa)
chy:CHY_2223 relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=130409 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
relA; GTP pyrophosphokinase (EC:2.7.6.5)
Uncharacterized protein {ECO:0000313|EMBL:EKE21022.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ar4r2_scaffold_653_20
RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated, Wolfebacteria, Parcubacteria, Bacteria

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19599..20363
DNA (765bp) protein (255aa)
Tax=RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated
ar4r2_scaffold_653_21
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

20372..22375
DNA (2004bp) protein (668aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP57459.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
ar4r2_scaffold_653_22

Not on your lists

comp(22698..24911)
DNA (2214bp) protein (738aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=77133 species="Bacteria; environment
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=uncultured bacterium RepID=K2EQ64_9BACT rbh
ar4r2_scaffold_653_23

Not on your lists

comp(24960..26036)
DNA (1077bp) protein (359aa)
DNA protecting protein DprA; K04096 DNA processing protein id=130407 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE21034.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Rossmann fold DNA uptake nucleotide-binding protein
ar4r2_scaffold_653_24
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(26218..27564)
DNA (1347bp) protein (449aa)
Putative uncharacterized protein id=4453990 bin=GWF2_Lentisphaerae_38_69 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
PhoH family protein; K07175 PhoH-like ATPase Tax=GWF2_Lentisphaerae_38_69_curated
phosphate starvation protein PhoH
ar4r2_scaffold_653_25
unknown

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27628..28032
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 26 items

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