ggKbase home page

ar4r2_scaffold_785

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_785_1
R_OD1_Campbellbacteria_34_15, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(267..548)
DNA (282bp) protein (94aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated
hypothetical protein id=68125 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
cas2; CRISPR-associated endoribonuclease Cas2
ar4r2_scaffold_785_2
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

comp(553..1509)
DNA (957bp) protein (319aa)
cas1; CRISPR-associated endonuclease Cas1 1 (EC:3.1.-.-)
hypothetical protein id=5091364 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP39512.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
ar4r2_scaffold_785_3

Not on your lists

comp(1516..2061)
DNA (546bp) protein (182aa)
hypothetical protein; K07464 putative RecB family exonuclease id=128851 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Uncharacterized protein {ECO:0000313|EMBL:EKD27478.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_785_4
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2139..6050)
DNA (3912bp) protein (1304aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
hypothetical protein id=5101957 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) rbh
hypothetical protein
ar4r2_scaffold_785_5
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6125..7975)
DNA (1851bp) protein (617aa)
tau:Tola_2505 deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] id=130875 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000313|EMBL:KKP58750.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
1-deoxy-D-xylulose-5-phosphate synthase
ar4r2_scaffold_785_6

Not on your lists

comp(7993..9462)
DNA (1470bp) protein (490aa)
bxe:Bxe_C0554 Mn2+/Fe2+ transporter id=130874 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE20514.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Mn2+/Fe2_ transporter, NRAMP family
ar4r2_scaffold_785_7
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9500..10435)
DNA (936bp) protein (312aa)
Putative uncharacterized protein Tax=GWF1_OD1_34_10
hypothetical protein id=130872 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
hypothetical protein
ar4r2_scaffold_785_8

Not on your lists

comp(10473..13265)
DNA (2793bp) protein (931aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FGG4_9BACT rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
uvrA; excinuclease ABC subunit A
ar4r2_scaffold_785_9

Not on your lists

13557..14279
DNA (723bp) protein (241aa)
transmembrane_regions 30..49 id=130871 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE20511.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ar4r2_scaffold_785_10
unknown

Not on your lists

14266..14424
DNA (159bp) protein (53aa)

This feature has no annotations

ar4r2_scaffold_785_11
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14478..14936)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GDG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP64785.1}; TaxID=1618720 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_34_56.;"
cytidyltransferase-like protein
ar4r2_scaffold_785_12
GWF1_OD1_35_5, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14992..16590)
DNA (1599bp) protein (533aa)
Sensor histidine kinase n=1 Tax=uncultured bacterium RepID=K2FTK3_9BACT rbh
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:KKP84112.1}; TaxID=1618716 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_35_5.;"
integral membrane sensor hybrid histidine kinase
ar4r2_scaffold_785_13
GWF1_OD1_35_5, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16702..17007)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FEN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP84113.1}; TaxID=1618716 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_35_5.;"
hypothetical protein
ar4r2_scaffold_785_14
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17040..17486)
DNA (447bp) protein (149aa)
hypothetical protein cdiviTM7_02425 n=2 Tax=candidate division TM7 RepID=UPI00016B25CA id=130748 bin=ACD7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKP58760.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
hypothetical protein
ar4r2_scaffold_785_15

Not on your lists

comp(17473..18528)
DNA (1056bp) protein (352aa)
Glycosyl transferase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD45_9FIRM id=130751 bin=ACD7 species=Acidaminococcus sp. D21 genus=Acidaminococcus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Glycosyl transferase {ECO:0000313|EMBL:EKE21111.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
ar4r2_scaffold_785_16
GWF1_OD1_35_5, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18567..19676)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GDG1_9BACT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKP84116.1}; TaxID=1618716 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_35_5.;"
group 1 glycosyl transferase
ar4r2_scaffold_785_17
RIFOXYA1_FULL_Bacteriovorax_38_20_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19727..20038)
DNA (312bp) protein (104aa)
Membrane protein involved in colicin uptake-like protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SS38_PSYIN
colicin uptake-like protein Tax=RIFOXYA1_FULL_Bacteriovorax_38_20_curated
colicin uptake-like protein
ar4r2_scaffold_785_18
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(20170..21624)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein Tax=GWC1_OD1_45_14
hypothetical protein id=17127 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
fibronectin type III domain-containing protein
ar4r2_scaffold_785_19
GWF2_OD1_35_39, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21660..22301)
DNA (642bp) protein (214aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SWA9_9BURK id=83960 bin=ACD56 species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Secreted protein {ECO:0000313|EMBL:KKP80222.1}; TaxID=1618721 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_35_39.;"
ar4r2_scaffold_785_trna_1
unknown

Not on your lists

22482..22554
DNA (73bp)
transferRNA
ar4r2_scaffold_785_trna_2
unknown

Not on your lists

22663..22734
DNA (72bp)
transferRNA
ar4r2_scaffold_785_20

Not on your lists


comp(22910..23581)
DNA (672bp) protein (224aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=129721 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=77133 spe
50S ribosomal protein L25
ar4r2_scaffold_785_21
GWF1_OD1_35_5, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(23652..23957)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GDS8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP84194.1}; TaxID=1618716 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_35_5.;"
ar4r2_scaffold_785_22
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24026..25120)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FTZ0_9BACT rbh
Rod shape-determining protein RodA Tax=GWE1_OD1_ACD7_35_17
rod shape-determining protein RodA
Displaying 24 items

View Taxonomy