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ar4r2_scaffold_1403

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1403_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
Pressure-regulated protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L211_HALNC
pressure-regulated protein
Pressure-regulated protein {ECO:0000313|EMBL:ACX96734.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothioba
ar4r2_scaffold_1403_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..1586)
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L212_HALNC rbh
MiaB-like tRNA modifying protein YliG
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
ar4r2_scaffold_1403_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1635..1946)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L213_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96736.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
ar4r2_scaffold_1403_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2102..2632
DNA (531bp) protein (177aa)
Putative asparaginase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L214_HALNC
asparaginase
Putative asparaginase {ECO:0000313|EMBL:ACX96737.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillu
ar4r2_scaffold_1403_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2640..5816)
DNA (3177bp) protein (1059aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037D5FA7 rbh
AcrB/AcrD/AcrF family protein
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:ACO33943.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
ar4r2_scaffold_1403_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5820..6902)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000375EFAD
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACO34117.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
ar4r2_scaffold_1403_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7070..8875)
DNA (1806bp) protein (602aa)
5'-Nucleotidase domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L215_HALNC rbh
5'-nucleotidase domain-containing protein
5'-Nucleotidase domain protein {ECO:0000313|EMBL:ACX96738.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Haloth
ar4r2_scaffold_1403_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9132..10124)
DNA (993bp) protein (331aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000313|EMBL:ACX96739.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACX96739.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacilla
DNA-directed DNA polymerase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L216_HALNC
ar4r2_scaffold_1403_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10128..10769)
DNA (642bp) protein (214aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=555778 species="Bacteria; Proteobacteria; Gamm
Thymidylate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L217_HALNC
ar4r2_scaffold_1403_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10766..11845)
DNA (1080bp) protein (360aa)
Aminodeoxychorismate lyase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L218_HALNC rbh
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ACX96741.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothioba
ar4r2_scaffold_1403_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11943..12785)
DNA (843bp) protein (281aa)
Aminodeoxychorismate lyase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L219_HALNC
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ACX96742.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothioba
ar4r2_scaffold_1403_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12782..14194)
DNA (1413bp) protein (471aa)
anthranilate synthase (EC:4.1.3.27)
Anthranilate synthase {ECO:0000313|EMBL:ACX96743.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ACX96743.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae;
Anthranilate synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L220_HALNC rbh
ar4r2_scaffold_1403_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14213..15454)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromat
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L221_HALNC rbh
3-oxoacyl-(acyl-carrier-protein) synthase 2 rbh
ar4r2_scaffold_1403_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15585..15824)
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L222_HALNC
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria
ar4r2_scaffold_1403_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16015..16767)
DNA (753bp) protein (251aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L223_HALNC rbh
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACX96746.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" so
ar4r2_scaffold_1403_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16985..17947)
DNA (963bp) protein (321aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chroma
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L224_HALNC rbh
malonyl CoA-acyl carrier protein transacylase
ar4r2_scaffold_1403_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18040..19245
DNA (1206bp) protein (402aa)
Glycosyl transferase group 1 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L225_HALNC rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACX96748.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothio
ar4r2_scaffold_1403_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19415..21241
DNA (1827bp) protein (609aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=555778 species
ATP-dependent RNA helicase DeaD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L226_HALNC rbh
DEAD/DEAH box helicase rbh
ar4r2_scaffold_1403_19
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21619..23019
DNA (1401bp) protein (467aa)
cytochrome C n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370AAAE
Cytochrome C {ECO:0000313|EMBL:KER72380.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Bu
cytochrome c
ar4r2_scaffold_1403_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23019..24251
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036A11CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88091.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
ar4r2_scaffold_1403_21
Aeromonas sp. L_1B5_3, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24344..24643
DNA (300bp) protein (100aa)
Cytochrome c-552 n=1 Tax=Aeromonas hydrophila ML09-119 RepID=R4VLL9_AERHY
Contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ81143.1}; TaxID=1588629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromo
cytochrome C
ar4r2_scaffold_1403_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(24728..25936)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X900_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD41662.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
cobalamin synthesis protein P47K
ar4r2_scaffold_1403_23
unknown

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26114..26176
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 23 items

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