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ar4r2_scaffold_1091

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1091_1
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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129..824
-----------------
DNA (696bp)
protein (232aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6L2_PALPW
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
ar4r2_scaffold_1091_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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833..1612
-----------------
DNA (780bp)
protein (260aa)
Transglutaminase domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6L3_PALPW
transglutaminase domain-containing protein
Transglutaminase domain-containing protein {ECO:0000313|EMBL:ADQ80357.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
ar4r2_scaffold_1091_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1609..2553
-----------------
DNA (945bp)
protein (315aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6L4_PALPW rbh
succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ADQ80358.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Pal
ar4r2_scaffold_1091_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2556..3485
-----------------
DNA (930bp)
protein (310aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6L5_PALPW rbh
succinylglutamate desuccinylase/aspartoacylase
succinylglutamate desuccinylase/aspartoacylase; K06987 Tax=CG_Paludi_01
ar4r2_scaffold_1091_5
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3708..4850
-----------------
DNA (1143bp)
protein (381aa)
hybS; [NiFe]-hydrogenase small subunit; K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=GWD2_Desulfuromonadales_54_10_curated
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit HydA id=4449659 bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
ar4r2_scaffold_1091_6
Denitrovibrio acetiphilus, Denitrovibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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4828..5778
-----------------
DNA (951bp)
protein (317aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H7J5_DENA2
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADD67994.1}; Flags: Precursor;; TaxID=522772 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Denitrovi
ar4r2_scaffold_1091_7
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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5775..6974
-----------------
DNA (1200bp)
protein (400aa)
hydrogenase n=1 Tax=Geovibrio thiophilus RepID=UPI0003B668D9
polysulfide reductase Tax=CG_Delta_06
polysulfide reductase NrfD
ar4r2_scaffold_1091_8
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6999..8729
-----------------
DNA (1731bp)
protein (577aa)
Hydrogenase 2 large subunit {ECO:0000313|EMBL:KGO34847.1}; EC=1.12.99.6 {ECO:0000313|EMBL:KGO34847.1};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfo
Probable Ni/Fe-hydrogenase, large subunit id=1978880 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Ni,Fe-hydrogenase I large subunit
ar4r2_scaffold_1091_9
unknown

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8802..9290
-----------------
DNA (489bp)
protein (163aa)
hydrogenase maturation protease
ar4r2_scaffold_1091_10
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

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comp(9310..10656)
-----------------
DNA (1347bp)
protein (449aa)
glycine dehydrogenase (decarboxylating) alpha subunit (EC:1.4.4.2) rbh
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospirace
Glycine dehydrogenase (Decarboxylating) alpha subunit n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B8J0_TURPD rbh
ar4r2_scaffold_1091_11
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10658..11056)
-----------------
DNA (399bp)
protein (133aa)
Glycine cleavage system H protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GCSH_CARHZ
gcvH; glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
ar4r2_scaffold_1091_12
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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comp(11074..13305)
-----------------
DNA (2232bp)
protein (744aa)
GAF sensor hybrid histidine kinase id=3161723 bin=GWB1_CP_36_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
PAS domain S-box Tax=GWB1_Spirochaetes_36_13_curated
Hpt sensor hybrid histidine kinase
ar4r2_scaffold_1091_13
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13315..14043)
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00036E46AA
family 3 extracellular solute-binding protein
Putative amino acid ABC transporter, periplasmic component {ECO:0000313|EMBL:EPJ50437.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanosp
ar4r2_scaffold_1091_14
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(14040..14375)
-----------------
DNA (336bp)
protein (112aa)
PF01796 domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UN62_9LEPT
PF01796 domain protein {ECO:0000313|EMBL:EPG65641.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-
hypothetical protein
ar4r2_scaffold_1091_15
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(14386..15549)
-----------------
DNA (1164bp)
protein (388aa)
Thiolase, C-terminal domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UKF4_9LEPT rbh
Thiolase, C-terminal domain protein {ECO:0000313|EMBL:EPG65690.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat
thiolase
ar4r2_scaffold_1091_16
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

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comp(15549..16304)
-----------------
DNA (756bp)
protein (252aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFM13394.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFM13394.1};; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turn
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B7Y7_TURPD
ar4r2_scaffold_1091_17
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

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comp(16317..16733)
-----------------
DNA (417bp)
protein (139aa)
MaoC-like protein id=1273417 bin=GWE1_Spirochaetes_32_154 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
maoC; MaoC-like acyl dehydratase Tax=GWE2_Spirochaetes_31_10_curated
maoC; MaoC-like acyl dehydratase
ar4r2_scaffold_1091_18
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

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comp(16748..17182)
-----------------
DNA (435bp)
protein (145aa)
Dehydratase id=1273418 bin=GWE1_Spirochaetes_32_154 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
hypothetical protein Tax=GWE2_Spirochaetes_31_10_curated
hypothetical protein
ar4r2_scaffold_1091_19
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17219..18373)
-----------------
DNA (1155bp)
protein (385aa)
acyl-CoA dehydrogenase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000379C479 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFA87602.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
acyl-CoA dehydrogenase
ar4r2_scaffold_1091_20
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(18564..19487)
-----------------
DNA (924bp)
protein (308aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G6X9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIJ78695.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
ar4r2_scaffold_1091_21
unknown

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comp(19447..19635)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

Displaying 21 items

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