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ar4r2_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_314_1

Not on your lists

62..481
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44673.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_2
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(510..938)
DNA (429bp) protein (143aa)
transmembrane_regions 23..45 id=124728 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transmembrane_regions 23..45 Tax=ACD78
ar4r2_scaffold_314_3
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists

comp(955..1191)
DNA (237bp) protein (79aa)
UPF0109 protein ACD_4C00342G0002 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G873_9BACT
UPF0109 protein LDC_0451 Tax=GWA2_OD1_47_12
ar4r2_scaffold_314_4
ACD2, Gracilibacteria, Bacteria

Not on your lists


comp(1248..1487)
DNA (240bp) protein (80aa)
30S ribosomal protein S16P id=34412 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
30S ribosomal protein S16P Tax=ACD2
SSU ribosomal protein s16p; K02959 small subunit ribosomal protein S16
ar4r2_scaffold_314_trna_3
unknown

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comp(1630..1711)
DNA (82bp)
transferRNA
ar4r2_scaffold_314_5
ACD78, Gracilibacteria, Bacteria

Not on your lists


comp(1739..1936)
DNA (198bp) protein (66aa)
ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=124732 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=ACD78
rpmB; 50S ribosomal protein L28
ar4r2_scaffold_314_6
ACD78, Gracilibacteria, Bacteria

Not on your lists


comp(1967..2284)
DNA (318bp) protein (106aa)
ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=69729 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=ACD78
rpsJ; 30S ribosomal protein S10
ar4r2_scaffold_314_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(2379..3569)
DNA (1191bp) protein (397aa)
sgl:SG2283 tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor EF-Tu [EC:3.6.5.3] Tax=ACD49
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=uncultured bacterium (gcode 4) RepID=K2ACQ1_9BACT rbh
ar4r2_scaffold_314_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3741..3950)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVT9_9BACT
seg 54..63 Tax=CG_GN02-01
ar4r2_scaffold_314_9
unknown

Not on your lists

comp(4006..4152)
DNA (147bp) protein (49aa)

This feature has no annotations

ar4r2_scaffold_314_trna_2
unknown

Not on your lists

comp(4052..4125)
DNA (74bp)
transferRNA
ar4r2_scaffold_314_trna_1
unknown

Not on your lists

comp(4235..4308)
DNA (74bp)
transferRNA
ar4r2_scaffold_314_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4438..5331)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AEE4_9BACT
transmembrane_regions 15..37 Tax=ACD4
FtsX; cell division protein FtsX; K09811 cell division transport system permease protein
ar4r2_scaffold_314_11
unknown

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5499..8228
DNA (2730bp) protein (910aa)

This feature has no annotations

ar4r2_scaffold_314_12
unknown

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8311..11031
DNA (2721bp) protein (907aa)

This feature has no annotations

ar4r2_scaffold_314_13
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11126..12181
DNA (1056bp) protein (352aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FC52_9BACT rbh
ar4r2_scaffold_314_14
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12259..13266
DNA (1008bp) protein (336aa)
Diguanylate cyclase n=1 Tax=Arcobacter sp. L RepID=G2HWL8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDF57468.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;
diguanylate cyclase
ar4r2_scaffold_314_15
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13296..14309)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXC8_9BACT
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 118
ar4r2_scaffold_314_16
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14335..14841)
DNA (507bp) protein (169aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae
Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4S1Z5_OSTLU
FKBP-type peptidyl-prolyl cis-trans isomerase
ar4r2_scaffold_314_17
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(14859..17906)
DNA (3048bp) protein (1016aa)
lcb:LCABL_27140 mfd; transcription-repair coupling factor (TrcF); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.1.-] id=35050 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
lcb:LCABL_27140 mfd; transcription-repair coupling factor (TrcF); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.1.-] Tax=ACD2
mfd; transcription-repair coupling factor (EC:3.6.1.-)
ar4r2_scaffold_314_18

Not on your lists

17987..18547
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AW50_9BACT
Uncharacterized protein; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
MCYN0011; hypothetical protein
ar4r2_scaffold_314_19
ACD49, Gracilibacteria, Bacteria

Not on your lists

18558..19073
DNA (516bp) protein (172aa)
transmembrane_regions 29..51 id=69122 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transmembrane_regions 29..51 Tax=ACD49
ar4r2_scaffold_314_20
unknown

Not on your lists

19089..19988
DNA (900bp) protein (300aa)
GTP-binding protein era homolog n=1 Tax=Spiroplasma citri RepID=Q14P63_SPICI id=50348 bin=ACD3 species=Spiroplasma citri genus=Spiroplasma taxon_order=Entomoplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
GTP-binding protein era homolog n=1 Tax=Spiroplasma citri RepID=Q14P63_SPICI Tax=ACD3
era; GTP-binding protein Era
ar4r2_scaffold_314_21

Not on your lists

comp(20020..21123)
DNA (1104bp) protein (368aa)
DsbA family oxidoreductase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YBT4_9BACT
Sodium/proton antiporter
DsbA family oxidoreductase {ECO:0000313|EMBL:EKD29793.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_22
ACD78, ACD78, ACD78, ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(21259..21534)
DNA (276bp) protein (92aa)
Plasmid_stabil id=123556 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Plasmid_stabil id=123556 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ar4r2_scaffold_314_23
unknown

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comp(21527..21703)
DNA (177bp) protein (59aa)

This feature has no annotations

ar4r2_scaffold_314_24
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(21832..22107)
DNA (276bp) protein (92aa)
Plasmid_stabil id=123556 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Plasmid_stabil Tax=ACD78
ar4r2_scaffold_314_25
unknown

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comp(22100..22279)
DNA (180bp) protein (60aa)

This feature has no annotations

ar4r2_scaffold_314_26
unknown

Not on your lists

comp(22411..22641)
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_314_27
unknown

Not on your lists

comp(22643..22819)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying items 1-30 of 47 in total

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