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ar4r2_scaffold_810

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_810_1
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(3..1433)
DNA (1431bp) protein (477aa)
acrF; acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Acriflavin resistance protein id=3192933 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
acriflavin resistance protein
ar4r2_scaffold_810_2
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1430..2935)
DNA (1506bp) protein (502aa)
Outer membrane efflux protein n=1 Tax=Leptospira noguchii str. Bonito RepID=M5VF95_9LEPT
Outer membrane efflux protein {ECO:0000313|EMBL:EMS86502.1}; TaxID=1193054 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii str. Cascata.;"
tolC; outer membrane protein
ar4r2_scaffold_810_3
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3177..3815)
DNA (639bp) protein (213aa)
Putative membrane protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ36_CLOA9
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFS77950.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 6
ar4r2_scaffold_810_4
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3820..4080)
DNA (261bp) protein (87aa)
transcriptional regulator n=1 Tax=Laceyella sacchari RepID=UPI0003B6A476
ArsR family transcriptional regulator {ECO:0000313|EMBL:EGK07101.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.
regulatory protein ArsR
ar4r2_scaffold_810_5
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4180..5298)
DNA (1119bp) protein (373aa)
ATPase AAA; K07133 Tax=RBG_16_Deltaproteobacteria_58_17_curated
AAA family ATPase id=4289447 bin=GWF2_Lentisphaerae_38_69 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349 rbh
ATPase AAA
ar4r2_scaffold_810_6
unknown

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5325..5627
DNA (303bp) protein (101aa)

This feature has no annotations

ar4r2_scaffold_810_7
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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5647..6582
DNA (936bp) protein (312aa)
ABC transporter related protein id=2487250 bin=GWA1_Deltaproteobacteria_52_35 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
ABC transporter; K09695 lipooligosaccharide transport system ATP-binding protein Tax=GWA1_Bdellovibrionales_52_35_curated
ABC transporter
ar4r2_scaffold_810_8
CG_ACD39_01, ACD39, Bacteria

Not on your lists

6579..7421
DNA (843bp) protein (281aa)
ABC transporter Tax=CG_ACD39_01
ABC-2 type transporter, transmembrane subunit id=2487253 bin=GWA1_Deltaproteobacteria_52_35 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
hypothetical protein
ar4r2_scaffold_810_9
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7418..8065
DNA (648bp) protein (216aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5LBC3_9BACI
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:EGL81363.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermar
RNA methyltransferase
ar4r2_scaffold_810_10
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8147..8905
DNA (759bp) protein (253aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE40_GEOUR
multi-sensor signal transduction histidine kinase
Tax=BJP_IG2069_Spirochaetales_48_31
ar4r2_scaffold_810_11
unknown

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8928..9350
DNA (423bp) protein (141aa)

This feature has no annotations

ar4r2_scaffold_810_12
unknown

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9347..10162
DNA (816bp) protein (272aa)

This feature has no annotations

ar4r2_scaffold_810_13
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10159..12459)
DNA (2301bp) protein (767aa)
7TM diverse intracellular signaling n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HRC7_9LEPT
7TM diverse intracellular signaling {ECO:0000313|EMBL:EQA55020.1}; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysi
hypothetical protein
ar4r2_scaffold_810_14
unknown

Not on your lists

12635..13903
DNA (1269bp) protein (423aa)

This feature has no annotations

ar4r2_scaffold_810_15
unknown

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13956..14489
DNA (534bp) protein (178aa)

This feature has no annotations

ar4r2_scaffold_810_16
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

14704..16545
DNA (1842bp) protein (614aa)
Hemerythrin-like metal-binding domain-containing protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P2L0_DESSD
methyl-accepting chemotaxis protein Tax=GWF1_Spirochaetes_41_5_curated
hemerythrin-like metal-binding domain-containing protein
ar4r2_scaffold_810_17
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16684..17892
DNA (1209bp) protein (403aa)
Ornithine decarboxylase (EC:4.1.1.17)
Ornithine decarboxylase {ECO:0000313|EMBL:AKB75272.1}; EC=4.1.1.17 {ECO:0000313|EMBL:AKB75272.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae
Ornithine decarboxylase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS97_METMA rbh
ar4r2_scaffold_810_18
Leptospira biflexa, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17907..21011)
DNA (3105bp) protein (1035aa)
Sensor histidine kinase and response regulator of a two component complex n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SE00_LEPBA rbh
two component response regulator sensor histidine kinase/response regulator subunits
Putative two-component response regulator putative membrane protein putative signal peptide {ECO:0000313|EMBL:ABZ97078.1}; TaxID=456481 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae;
ar4r2_scaffold_810_19
unknown

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comp(21038..22150)
DNA (1113bp) protein (371aa)

This feature has no annotations

ar4r2_scaffold_810_20
unknown

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comp(22147..22287)
DNA (141bp) protein (47aa)

This feature has no annotations

ar4r2_scaffold_810_21
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22367..24508
DNA (2142bp) protein (714aa)
hrpB; ATP-dependent helicase HrpB (EC:3.6.4.-)
ATP-dependent helicase HrpB {ECO:0000313|EMBL:CQR55577.1}; EC=3.6.4.- {ECO:0000313|EMBL:CQR55577.1};; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036EDCE4
Displaying 21 items

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