ggKbase home page

ar4r2_scaffold_834

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_834_1
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..452
DNA (450bp) protein (150aa)
Ribulose 1,5-bisphosphate carboxylase, large subunit n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YDD4_THIV6
ribulose 1,5-bisphosphate carboxylase, large subunit
Ribulose 1,5-bisphosphate carboxylase, large subunit {ECO:0000313|EMBL:AFL75002.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" sour
ar4r2_scaffold_834_2
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(480..2240)
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000369BC72 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27100.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmen
eriC1; protein EriC1
ar4r2_scaffold_834_3
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(2233..2943)
DNA (711bp) protein (237aa)
PTS IIA-like nitrogen-regulatory protein PtsN id=2607210 bin=GWF1_Spirochaetes_60_12 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
excisionase family DNA-binding Tax=GWB1_Spirochaetes_60_80_curated
PTS fructose transporter subunit IIA
ar4r2_scaffold_834_4
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3228..4529
DNA (1302bp) protein (434aa)
ATP-binding region ATPase domain protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CE04_9LEPT
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:EHQ06556.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
ATP-binding region ATPase domain protein
ar4r2_scaffold_834_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4575..5045
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Thauera RepID=N6YMC9_9RHOO
hypothetical protein
Copper resistance D family protein {ECO:0000313|EMBL:KIN90913.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB
ar4r2_scaffold_834_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5042..6553)
DNA (1512bp) protein (504aa)
Putative membrane protein n=2 Tax=Leptospira weilii RepID=M6LFN4_9LEPT
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
ar4r2_scaffold_834_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6534..7865)
DNA (1332bp) protein (444aa)
lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=GWC2_Nitrospirae_57_13_curated
UDP-3-O-acyl-N-acetylglucosamine deacetylase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B40 rbh
lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase
ar4r2_scaffold_834_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7946..10396)
DNA (2451bp) protein (817aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWP8_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08227.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
ar4r2_scaffold_834_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11874..13790
DNA (1917bp) protein (639aa)
ABC transporter related protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K449_DEHLB rbh
ABC transporter-like protein
Tax=BJP_IG2157_Anaerolineales_55_23
ar4r2_scaffold_834_10
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13819..14463)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EAX46807.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans N
hypothetical protein
ar4r2_scaffold_834_11
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14543..17110)
DNA (2568bp) protein (856aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53E5 rbh
Protease {ECO:0000313|EMBL:ELP29967.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SWK14.;"
hypothetical protein
ar4r2_scaffold_834_12
Leptospira borgpetersenii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17116..18105)
DNA (990bp) protein (330aa)
ATPase, AAA family n=2 Tax=Leptospira borgpetersenii RepID=K8HV33_LEPBO rbh
ATPase AAA {ECO:0000313|EMBL:KGE21962.1}; TaxID=280505 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira borgpetersenii serovar Ballum.;"
AAA ATPase
ar4r2_scaffold_834_13
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18220..18996)
DNA (777bp) protein (259aa)
Nucleotidyltransferase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CDE4_9LEPT rbh
Nucleotidyltransferase {ECO:0000313|EMBL:EHQ05448.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
hypothetical protein rbh
ar4r2_scaffold_834_14
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19019..19933)
DNA (915bp) protein (305aa)
Tax=BJP_IG2069_Desfulfarculales_53_13
ar4r2_scaffold_834_15
Leptospira yanagawae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20072..20464)
DNA (393bp) protein (131aa)
HEPN domain protein n=1 Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 RepID=R8ZUG3_9LEPT
HEPN domain protein {ECO:0000313|EMBL:EOQ89457.1}; TaxID=1249483 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira yanagawae serovar Saopaulo str. Sao Pa
HEPN domain-containing protein
ar4r2_scaffold_834_16
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20451..20795)
DNA (345bp) protein (115aa)
DNA polymerase, beta-like region
DNA polymerase, beta-like region id=4503239 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
DNA polymerase, beta-like region Tax=GWC2_Deltaproteobacteria_65_14_curated
ar4r2_scaffold_834_17
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20855..21004)
DNA (150bp) protein (50aa)
DNA methyltransferase n=1 Tax=Mariprofundus ferrooxydans RepID=UPI000370DC4C
Restriction endonuclease HindVIIP subunit M {ECO:0000313|EMBL:KEQ19723.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" sourc
N-6 DNA methylase
ar4r2_scaffold_834_18
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21042..21959)
DNA (918bp) protein (306aa)
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q6W0_METMZ
Type I restriction-modification system, DNA-methyltransferase subunit M
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:AGF95878.1}; TaxID=1236903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcina
ar4r2_scaffold_834_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22404..22787
DNA (384bp) protein (128aa)
HPP family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBU1_FLUTR
HPP family protein
HPP family protein {ECO:0000313|EMBL:AEA42169.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DS
ar4r2_scaffold_834_20
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22981..23991)
DNA (1011bp) protein (337aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6I935_9LEPT
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:EQA54817.1}; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar
(Fe-S)-binding protein
Displaying 20 items

View Taxonomy