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ar4r2_scaffold_1967

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1967_1
Parcubacteria bacterium GW2011_GWB1_42_9, Parcubacteria, Bacteria

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comp(660..1556)
DNA (897bp) protein (299aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JHC1_HALH3
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKS77203.1}; TaxID=1618871 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_9.;"
ar4r2_scaffold_1967_trna_1
unknown

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comp(1619..1692)
DNA (74bp)
transferRNA
ar4r2_scaffold_1967_2
Borrelia hermsii, Borrelia, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1708..2130)
DNA (423bp) protein (141aa)
50S ribosomal protein L15 n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B77E60
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1313291 species="Bacteria; Spirochaetes; Spirochaetales; Borreliaceae; Borrelia.;" source="Borrelia he
rplO; 50S ribosomal protein L15
ar4r2_scaffold_1967_3
R_OP11_Roizmanbacteria_44_13, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists


comp(2139..2417)
DNA (279bp) protein (93aa)
50S ribosomal protein L25 n=1 Tax=uncultured bacterium RepID=K2B7X4_9BACT
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_44_13_curated
ar4r2_scaffold_1967_4
RHI_TM6_38_8, TM6, Bacteria

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comp(2420..3001)
DNA (582bp) protein (194aa)
Elongation factor Ts n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=EFTS_DICTD
translation elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_12_FULL_TM6_38_8_curated
tsf; elongation factor Ts
ar4r2_scaffold_1967_5
R_SM2F11_46_24, SM2F11, Bacteria

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comp(3003..3629)
DNA (627bp) protein (209aa)
30S ribosomal protein S5 n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DTA8_9FIRM
rpsE; 30S ribosomal subunit protein S5 Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
rpsE; 30S ribosomal protein S5
ar4r2_scaffold_1967_6
Leuconostoc gelidum, Leuconostoc, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3648..3971)
DNA (324bp) protein (108aa)
50S ribosomal protein L18 n=1 Tax=Leuconostoc gasicomitatum (strain DSM 15947 / CECT 5767 / JCM 12535 / LMG 18811 / TB1-10) RepID=D8MHP5_LEUGT
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:CBL92363.1}; TaxID=762550 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Leuconostoc.;" source=
ar4r2_scaffold_1967_7
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

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comp(3981..4526)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=RL6_BEII9
50S ribosomal protein L6 {ECO:0000313|EMBL:KKP65252.1}; TaxID=1618720 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_34_56.;"
rplF; 50S ribosomal protein L6
ar4r2_scaffold_1967_8
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(4605..5207)
DNA (603bp) protein (201aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=123214 species="Bacteria; Aquificae; Aquifical
Thymidylate kinase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTF2_PERMH
ar4r2_scaffold_1967_9
unknown

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comp(5210..5857)
DNA (648bp) protein (216aa)

This feature has no annotations

ar4r2_scaffold_1967_10
unknown

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comp(5903..6697)
DNA (795bp) protein (265aa)

This feature has no annotations

ar4r2_scaffold_1967_11
unknown

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comp(6702..7223)
DNA (522bp) protein (174aa)

This feature has no annotations

ar4r2_scaffold_1967_12

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comp(7227..7706)
DNA (480bp) protein (160aa)
V-type ATP synthase subunit K (EC:3.6.3.14); K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] id=97730 bin=ACD65 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:EKD48108.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATP synthase subunit C
ar4r2_scaffold_1967_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7767..9608)
DNA (1842bp) protein (614aa)
V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=RBG_19FT_COMBO_JS1_35_14_curated
V-type ATPase 116 kDa subunit n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ATN7_THEM3
V-type ATPase 116 kDa subunit
ar4r2_scaffold_1967_14
unknown

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comp(9614..9868)
DNA (255bp) protein (85aa)

This feature has no annotations

ar4r2_scaffold_1967_15
unknown

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comp(9870..10448)
DNA (579bp) protein (193aa)

This feature has no annotations

ar4r2_scaffold_1967_16
R_RIF_OD1_03_52_15, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

10596..12188
DNA (1593bp) protein (531aa)
ftsH; cell division protein FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_52_15_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XIS8_CALS8
Displaying 17 items

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