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ar4r2_scaffold_1005_25

Organism: ALUMROCK_MS4_CPR_32_13

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 17021..19168

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 413.0
  • Bit_score: 360
  • Evalue 4.90e-96
nth:Nther_1215 RNA polymerase, sigma 70 subunit, RpoD family; K03086 RNA polymerase primary sigma factor id=3296 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 461.0
  • Bit_score: 349
  • Evalue 6.10e-93
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 381.0
  • Bit_score: 308
  • Evalue 5.80e-81

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Taxonomy

R_SM2F11_46_24 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 2148
ATGTCTAAAACTACCATCGCAGATTTGATGAAACATAAATCAGAAGACGACCAAAACAAGTCTTCCGCTAATCGTAAAAGATTAACTATTGGATCATCCAATCGTAAAAGAATTAATGTGCCCAAGATTACTAAGGTTTTTGGGAAAAAGGCCGAAAAAGAAGAGATTGAAAATGAATCTGAAGATTTTTTACATGAAAGCGATGATGATTTGATATCTGCTAGACCAAAAAATAAACAAAAACAAGAATTTGTAACTAGAAAAGGCATATTGGGTTTAAATTTAATTTCTACTGCTGATGAAAATCGTAAAGCCGCTCTATCAGATTCTTCTATTGAACAGGTTGGTGATAAAAGATACAGAACAACAGAGACAGGCGTAAAAGTTAAGATGAAAAAAATTACTAAAAAGCGAAAAGCGAAAAGTAGTAATAAAAAGCTAAAAAAATTTATCGATACCGGAGCAGAAATGTATCCTTATTTCCAGGAGCAGAGTGTTGAATTTCAAGAATTAGCGGTGGAGTTAATCAAAACTGGTATATCTCGAGGTTTTGTAACAGAAGATGAACTATTACGCCTATTGCCAGACCCAGAAAATAATGTGGAGCTTCTATCTGATTTAATGGAACTCTGCGAAGATTCTGGAGCAAGTGTAAAATTCGAAAACAGCTTAGATGACTTGTGGGCCGAGCTGGATGCAGATGAAGCTGTCAAAAAAAAGGAGGTGGATGAGCAATTCAAGATCTCTGAATCTTTAGCTGGCGATATAACTGGGGCAGAATTAAACGACAATACTATTCAAAACTACATCAGAGATGTATCAAAGTACCCAGTTCTTCTAAAAGACGAAGAAGTAGAATTAGCTAAAAGAATTGAAGAAGGTGATCAGGCTGCTAAAAGAGAGCTAACTTATGCTAATTTAAAATTGGTAGTACACAACGCAAAAAAATATATGGGACGTAATTTAGCTTTCTTGGACTTAATTCAAGAAGGAAATATAGGTCTATTCCGTGCAGTAGAAAAATTCGACTGGAGAAAAGGTTATAAATTCTCAACTTATGCAAGTTACTGGATAGATCAAAGTATTCGTAGAGCTTTAGCTGATCAGTCTAGACCAGTTCGTTTACCAGTACATGTTGAAGAAAAATTATCTAAATTTAAAAGAGAGAGGCGTGGTCTTATTGAAGAATTAGGACGCGAACCCACCGATGATGAATTAGCAGAAAAATTAGACATAGACTTAGATACTGTTTATTATTTTAAAAAAATAAACCAAGACACTGTCTCGATAGATGCTAATGTGAGTGGGGGGAAAGGTGATAGCGATACACAAATGGTAGAAATGATAGAAGACGAAGAAAGTGTTCAGCCAATGGAAACAGCATCCAACCAAGTCTTACGCAAGTATCTAATAGATATAATAGAATCTTCTTTGGAACCAAGAGAGAAAAAAGTTATTATGTTACGTTTTGGTTTAGATGGTACAAATGTAACCCATACTTTAGAAGAAATAGGACAAGTGTTTAATGTAACCAGAGAAAGAGTTAGGCAGATAGAAGAAGTTGCCTTAAATAAGATCAGGGGACACGAACAAAGTTATAAATTAATTGATTTCTTGGAGGGTGTTAAGCCAGATTTGTTTGCTAAAGGTAAAAAAGATAAAAGGTTAAACATGTCTGACATACCTATGGGTAAGAAAATCACGTGGGAAGAGGTTGTAGAAGTGTTAACACCTCAAATCCTAGCTAAAAATGTATCAATGTTCTTCTTAAAAGGTAAAATGGGTAGTGGAAAAACATATTTAACACAAAATATGTGTAAAAATCTAGGTGTTAAAGATGATGTATCATCACCTACTTACGATTTAGTGAAACATTACGATATACCCAACGGAACTGAAGCTAAAAATTCTGCTAACTTTGAACAAATTTCTCACCTTGATTTACATAGACTAAAAAATATTACCGATAATGATTTAGGTTGGATTGAGGAAGAATTAATAGCCACCAACAACATAATTTTCGTTGAGTGGCCAGAAAAACTACTAAAAAAACAAGTATTTATGCAATTTTTAGGCAGGAATTATTTGGTTATAGAATGCAAATCTAATAAAAAAGCTGAAAGATACTACAGAATTAGAAATAAATAA
PROTEIN sequence
Length: 716
MSKTTIADLMKHKSEDDQNKSSANRKRLTIGSSNRKRINVPKITKVFGKKAEKEEIENESEDFLHESDDDLISARPKNKQKQEFVTRKGILGLNLISTADENRKAALSDSSIEQVGDKRYRTTETGVKVKMKKITKKRKAKSSNKKLKKFIDTGAEMYPYFQEQSVEFQELAVELIKTGISRGFVTEDELLRLLPDPENNVELLSDLMELCEDSGASVKFENSLDDLWAELDADEAVKKKEVDEQFKISESLAGDITGAELNDNTIQNYIRDVSKYPVLLKDEEVELAKRIEEGDQAAKRELTYANLKLVVHNAKKYMGRNLAFLDLIQEGNIGLFRAVEKFDWRKGYKFSTYASYWIDQSIRRALADQSRPVRLPVHVEEKLSKFKRERRGLIEELGREPTDDELAEKLDIDLDTVYYFKKINQDTVSIDANVSGGKGDSDTQMVEMIEDEESVQPMETASNQVLRKYLIDIIESSLEPREKKVIMLRFGLDGTNVTHTLEEIGQVFNVTRERVRQIEEVALNKIRGHEQSYKLIDFLEGVKPDLFAKGKKDKRLNMSDIPMGKKITWEEVVEVLTPQILAKNVSMFFLKGKMGSGKTYLTQNMCKNLGVKDDVSSPTYDLVKHYDIPNGTEAKNSANFEQISHLDLHRLKNITDNDLGWIEEELIATNNIIFVEWPEKLLKKQVFMQFLGRNYLVIECKSNKKAERYYRIRNK*