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ar4r2_scaffold_1005

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1005_1
unknown

Not on your lists

comp(1..303)
DNA (303bp) protein (101aa)

This feature has no annotations

ar4r2_scaffold_1005_2
unknown

Not on your lists

comp(361..855)
DNA (495bp) protein (165aa)

This feature has no annotations

ar4r2_scaffold_1005_3
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

924..1163
DNA (240bp) protein (80aa)
DNA-binding helix-turn-helix protein id=4129768 bin=GWF2_Clostridiales_36_10 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
regulatory protein Tax=GWF2_Clostridiales_36_10_curated
ar4r2_scaffold_1005_4
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

1218..2762
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00035DDB38
Mg chelatase, subunit ChlI
Tax=BJP_IG2158_OD1_28_51
ar4r2_scaffold_1005_5
unknown

Not on your lists

comp(2759..3394)
DNA (636bp) protein (212aa)

This feature has no annotations

ar4r2_scaffold_1005_6
unknown

Not on your lists

3428..4120
DNA (693bp) protein (231aa)

This feature has no annotations

ar4r2_scaffold_1005_7
unknown

Not on your lists

4310..5446
DNA (1137bp) protein (379aa)

This feature has no annotations

ar4r2_scaffold_1005_8
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

5508..6626
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z7X8_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
chaperone protein DnaJ
ar4r2_scaffold_1005_9
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6645..7670)
DNA (1026bp) protein (342aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeo
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Spirosoma luteum RepID=UPI00037DB8F3
glyceraldehyde-3-phosphate dehydrogenase
ar4r2_scaffold_1005_10
unknown

Not on your lists

comp(7716..8015)
DNA (300bp) protein (100aa)

This feature has no annotations

ar4r2_scaffold_1005_11
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(8057..9010)
DNA (954bp) protein (318aa)
class II fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ACK41373.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ACK41373.1};; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Di
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DYJ1_DICTD
ar4r2_scaffold_1005_12
R_OD1_Campbellbacteria_34_15, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9084..9404)
DNA (321bp) protein (107aa)
UPF0109 protein BACCAP_02089 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV54_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated
hypothetical protein
ar4r2_scaffold_1005_13
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists


comp(9420..9659)
DNA (240bp) protein (80aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
30S ribosomal protein S16 id=1263804 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
rpsP; 30S ribosomal protein S16
ar4r2_scaffold_1005_14
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists


comp(9668..10300)
DNA (633bp) protein (211aa)
ribosomal protein S4, bacterial/organelle type Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
30S ribosomal protein S4 id=4069800 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
30S ribosomal protein S4
ar4r2_scaffold_1005_15
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists


comp(10313..10705)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJV3_9FIRM
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
rpsK; ribosomal protein S11
ar4r2_scaffold_1005_16
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists


comp(10751..11140)
DNA (390bp) protein (130aa)
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S13
Tax=BJP_08E140C01_OD1_43_7
ar4r2_scaffold_1005_17
unknown

Not on your lists

comp(11152..11340)
DNA (189bp) protein (63aa)

This feature has no annotations

ar4r2_scaffold_1005_18
unknown

Not on your lists

comp(11347..11664)
DNA (318bp) protein (106aa)

This feature has no annotations

ar4r2_scaffold_1005_19
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(11738..12583)
DNA (846bp) protein (282aa)
exodeoxyribonuclease III (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP42_METAC
DNA-(apurinic or apyrimidinic site) lyase
ar4r2_scaffold_1005_20
unknown

Not on your lists

comp(12587..13507)
DNA (921bp) protein (307aa)

This feature has no annotations

ar4r2_scaffold_1005_21
R_SM2F11_45_18, SM2F11, Bacteria

Not on your lists

13596..14573
DNA (978bp) protein (326aa)
UvrABC system protein C n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CLR3_ELIME
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFCSPHIGHO2_01_FULL_SM2F11_45_18_curated
excinuclease ABC subunit C
ar4r2_scaffold_1005_22
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(14807..15730)
DNA (924bp) protein (308aa)
tde:TDE1659 alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=2816 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=GWF1_OD1_34_10
ar4r2_scaffold_1005_23
unknown

Not on your lists

comp(15733..16128)
DNA (396bp) protein (132aa)

This feature has no annotations

ar4r2_scaffold_1005_24
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16154..16936)
DNA (783bp) protein (261aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RXD4_MYCXE
Peptidyl-prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:EID15787.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Myco
cyclophilin type peptidyl-prolyl cis-trans isomerase
ar4r2_scaffold_1005_25
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

17021..19168
DNA (2148bp) protein (716aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
nth:Nther_1215 RNA polymerase, sigma 70 subunit, RpoD family; K03086 RNA polymerase primary sigma factor id=3296 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RNA polymerase sigma factor RpoD
ar4r2_scaffold_1005_26
unknown

Not on your lists

19216..19701
DNA (486bp) protein (162aa)

This feature has no annotations

ar4r2_scaffold_1005_27
unknown

Not on your lists

19730..20722
DNA (993bp) protein (331aa)

This feature has no annotations

Displaying 27 items

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