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ar4r2_scaffold_847

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_847_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..813
DNA (813bp) protein (271aa)
30S ribosomal protein S3 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYN5_THIK1 rbh
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (
ar4r2_scaffold_847_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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825..1241
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=2 Tax=Thiomonas RepID=D5WYN4_THIK1
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thi
ar4r2_scaffold_847_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1252..1458
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=2 Tax=Thiomonas RepID=D5WYN3_THIK1
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ar4r2_scaffold_847_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1462..1728
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=2 Tax=Thiomonas RepID=D5WYN2_THIK1
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000313|EMBL:CAZ90018.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thio
ar4r2_scaffold_847_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2024..3337
DNA (1314bp) protein (438aa)
gdhA; glutamate dehydrogenase (GDH) (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN89_THIA3 rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM
ar4r2_scaffold_847_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3369..4295)
DNA (927bp) protein (309aa)
Putative Permease of the drug/metabolite transporter (DMT) superfamily RarD domain n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN88_THIA3 rbh
putative Permease of the drug/metabolite transporter (DMT) superfamily; RarD domain
Putative Permease of the drug/metabolite transporter (DMT) superfamily RarD domain {ECO:0000313|EMBL:CAZ90016.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; T
ar4r2_scaffold_847_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4377..5468)
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN87_THIA3 rbh
engD; GTP-dependent nucleic acid-binding protein engD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (stra
ar4r2_scaffold_847_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5564..6706)
DNA (1143bp) protein (381aa)
Carbohydrate-selective porin OprB n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM8_THIK1 rbh
carbohydrate-selective porin OprB
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ADG32205.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas i
ar4r2_scaffold_847_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6750..7484)
DNA (735bp) protein (245aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteri
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM7_THIK1 rbh
ABC transporter
ar4r2_scaffold_847_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7494..8696)
DNA (1203bp) protein (401aa)
Putative ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN84_THIA3 rbh
Putative ABC-type antimicrobial peptide transport system, permease component
Putative ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CAZ90012.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomon
ar4r2_scaffold_847_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8717..9955)
DNA (1239bp) protein (413aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM5_THIK1 rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADG32202.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia
ar4r2_scaffold_847_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10424..11554
DNA (1131bp) protein (377aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYM4_THIK1 rbh
ar4r2_scaffold_847_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11588..11779
DNA (192bp) protein (64aa)
putative 4-oxalocrotonate tautomerase (EC:5.3.2.-)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032, ECO:0000313|EMBL:CAZ90009.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
4-oxalocrotonate tautomerase family enzyme n=2 Tax=Thiomonas RepID=D5WYM3_THIK1
ar4r2_scaffold_847_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11942..13696
DNA (1755bp) protein (585aa)
Glyoxylate carboligase (Tartronate-semialdehyde synthase) {ECO:0000313|EMBL:CAZ90007.1}; EC=4.1.1.47 {ECO:0000313|EMBL:CAZ90007.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria;
gcl; glyoxylate carboligase (Tartronate-semialdehyde synthase) (EC:4.1.1.47)
Glyoxylate carboligase (Tartronate-semialdehyde synthase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN79_THIA3 rbh
ar4r2_scaffold_847_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13707..14480
DNA (774bp) protein (258aa)
hyi; hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CAZ90006.1}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CAZ90006.1};; TaxID=426114 species="Bacteria; Prote
Hydroxypyruvate isomerase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN78_THIA3 rbh
ar4r2_scaffold_847_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..15405
DNA (891bp) protein (297aa)
glxR; 2-hydroxy-3-oxopropionate reductase (Tartronate semialdehyde reductase) (TSAR) (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase (Tartronate semialdehyde reductase) (TSAR) {ECO:0000313|EMBL:CAZ90005.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CAZ90005.1};; TaxID=426114 species="Bacteria; Proteobacteria
2-hydroxy-3-oxopropionate reductase (Tartronate semialdehyde reductase) (TSAR) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN77_THIA3 rbh
ar4r2_scaffold_847_17
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15420..16727
DNA (1308bp) protein (436aa)
hydroxypyruvate reductase (EC:1.1.1.81)
Hydroxypyruvate reductase {ECO:0000313|EMBL:ADG32195.1}; EC=1.1.1.81 {ECO:0000313|EMBL:ADG32195.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" so
Hydroxypyruvate reductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYL8_THIK1 rbh
ar4r2_scaffold_847_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16811..17719
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYL7_THIK1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDW93861.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ar4r2_scaffold_847_19
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17637..18578)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYL6_THIK1 rbh
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDW93862.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB
LysR family transcriptional regulator
ar4r2_scaffold_847_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18697..19908
DNA (1212bp) protein (404aa)
Putative transporter MFS type ynfM or yzyC n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN73_THIA3 rbh
putative transporter; MFS type ynfM or yzyC
Putative transporter MFS type ynfM or yzyC {ECO:0000313|EMBL:CAZ90001.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxy
ar4r2_scaffold_847_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19889..20080)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CN68_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32191.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiob
ar4r2_scaffold_847_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20097..21302)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYL3_THIK1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32190.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiob
ar4r2_scaffold_847_23
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21360..22154
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Thiomonas RepID=D5WYL2_THIK1 rbh
Putative short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDW93866.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp.
short-chain dehydrogenase/reductase SDR
ar4r2_scaffold_847_24
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22190..22591
DNA (402bp) protein (134aa)
putative Dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=2 Tax=Thiomonas RepID=D5WYL1_THIK1
Dihydroneopterin aldolase {ECO:0000313|EMBL:ADG32188.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thi
ar4r2_scaffold_847_25
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22588..23514
DNA (927bp) protein (309aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN64_THIA3 rbh
Putative N-TYPE ATP PYROPHOSPHATASE ydaO
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas ars
ar4r2_scaffold_847_26
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23532..23792
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN63_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW93870.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Conserved hypothetical protein; putative exported protein
Displaying 26 items

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