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ar4r2_scaffold_1178

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1178_1
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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29..421
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G721_9GAMM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ect
rpsH; 30S ribosomal protein S8
ar4r2_scaffold_1178_2
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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439..972
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GEC0_9GAMM
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alc
ar4r2_scaffold_1178_3
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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997..1353
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=RL18_SACD2
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharop
ar4r2_scaffold_1178_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1365..1871
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXI9_HALNC
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halot
ar4r2_scaffold_1178_5
GWC2_Pseudomonadales_63_15_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1876..2064
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=2 Tax=Pseudogulbenkiania RepID=G2IW63_PSEUL
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=GWC2_Pseudomonadales_63_15_curated
50S ribosomal protein L30
ar4r2_scaffold_1178_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2067..2492
DNA (426bp) protein (142aa)
50S ribosomal protein L15 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ1_HALNC
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halo
ar4r2_scaffold_1178_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2496..3836
DNA (1341bp) protein (447aa)
Protein translocase subunit SecY n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ2_HALNC
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillacea
ar4r2_scaffold_1178_8
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3917..4273
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Leucothrix mucor RepID=UPI0003B69C12
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis
ar4r2_scaffold_1178_9
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4311..4700
DNA (390bp) protein (130aa)
SSU ribosomal protein S11P / histidine kinase (EC:2.7.3.-)
30S ribosomal protein S11 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=RS11_SACD2
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio s
ar4r2_scaffold_1178_10
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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4715..5341
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=10 Tax=Haemophilus parasuis RepID=RS4_HAEPS rbh
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=456298 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus par
ar4r2_scaffold_1178_11
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5360..6361
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase, alpha subunit {ECO:0000313|EMBL:AKH68620.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKH68620.1};; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadal
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RPOA_THISH
ar4r2_scaffold_1178_12
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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6392..6775
DNA (384bp) protein (128aa)
50S ribosomal protein L17 n=2 Tax=Photobacterium profundum RepID=RL17_PHOPR
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacteri
ar4r2_scaffold_1178_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6860..7705)
DNA (846bp) protein (282aa)
bis(5'-nucleosyl)-tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|SAAS:SAAS00088330};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chro
diadenosine tetraphosphatase n=1 Tax=Nevskia ramosa RepID=UPI0003B6F822
ar4r2_scaffold_1178_14
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7744..8364)
DNA (621bp) protein (207aa)
Methyltransferase type 11 n=2 Tax=sulfur-oxidizing symbionts RepID=G2FG01_9GAMM
Methyltransferase type 11 {ECO:0000313|EMBL:EGV52751.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (
type 11 methyltransferase
ar4r2_scaffold_1178_15
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8368..8754)
DNA (387bp) protein (129aa)
ApaG protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BAB3_9GAMM
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail
conserved hypothetical protein
ar4r2_scaffold_1178_16
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8833..9555)
DNA (723bp) protein (241aa)
6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=RBG_16_Gammaproteobacteria_57_12_curated
6-phosphogluconolactonase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JCA5_ANAD2
6-phosphogluconolactonase
ar4r2_scaffold_1178_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9574..10383)
DNA (810bp) protein (270aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMX8_THISH
dimethyladenosine transferase
ar4r2_scaffold_1178_18
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10392..11378)
DNA (987bp) protein (329aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ISQ4_9GAMM
ar4r2_scaffold_1178_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11389..12807)
DNA (1419bp) protein (473aa)
molecular chaperone SurA n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036E1FD9 rbh
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
SurA domain-containing protein
ar4r2_scaffold_1178_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12869..15157)
DNA (2289bp) protein (763aa)
LPS-assembly protein LptD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L087_HALNC
organic solvent tolerance protein
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Haloth
ar4r2_scaffold_1178_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15217..15870)
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L086_HALNC
adenylate kinase
ar4r2_scaffold_1178_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15968..16507
DNA (540bp) protein (180aa)
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=555778 species="Bac
Inorganic pyrophosphatase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L085_HALNC
ar4r2_scaffold_1178_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16579..18426
DNA (1848bp) protein (616aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 {ECO:0000313|EMBL:ACX96107.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACX96107.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobaci
Penicillin-binding protein 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L084_HALNC
ar4r2_scaffold_1178_24
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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18423..18701
DNA (279bp) protein (93aa)
Rod shape-determining protein RodA n=2 Tax=Acinetobacter guillouiae RepID=N8TLU9_ACIGI
Rod shape-determining membrane protein cell elongation {ECO:0000313|EMBL:CDI01496.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter
rod shape-determining protein RodA
Displaying 24 items

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