ggKbase home page

ar4r2_scaffold_1785

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1785_1
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1826
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000379236F rbh
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EGK71417.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" so
signal transduction histidine kinase-like protein
ar4r2_scaffold_1785_2
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(2077..3753)
DNA (1677bp) protein (559aa)
hypothetical protein Tax=CG_Proteo_01
ar4r2_scaffold_1785_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3951..5042)
DNA (1092bp) protein (364aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1172194 species="Bacteria; Proteobacteria; Gam
Ribonuclease D n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZG02_9GAMM
ribonuclease D
ar4r2_scaffold_1785_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5052..5684)
DNA (633bp) protein (211aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7U2_NITMU
ar4r2_scaffold_1785_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5697..6113)
DNA (417bp) protein (139aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY41_HALNC
TraR/DksA family transcriptional regulator
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobaci
ar4r2_scaffold_1785_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6233..7687
DNA (1455bp) protein (485aa)
hypothetical protein id=12497414 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
ar4r2_scaffold_1785_7
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7909..8964
DNA (1056bp) protein (352aa)
ATPase n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI000365EF5E rbh
ParA-like protein {ECO:0000313|EMBL:KFB66862.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
ATPase domain-containing protein
ar4r2_scaffold_1785_8
unknown

Not on your lists

comp(9085..9867)
DNA (783bp) protein (261aa)

This feature has no annotations

ar4r2_scaffold_1785_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9864..10385)
DNA (522bp) protein (174aa)
Type II secretion system protein M n=1 Tax=Shewanella baltica (strain OS185) RepID=A6WHP0_SHEB8
general secretion pathway M protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
ar4r2_scaffold_1785_10
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10382..11596)
DNA (1215bp) protein (405aa)
Type II secretion system protein L n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZN9_HALHL
general secretion pathway protein L; K02461 general secretion pathway protein L Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
general secretion pathway protein L
ar4r2_scaffold_1785_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11625..12578)
DNA (954bp) protein (318aa)
Type II secretion system protein K n=1 Tax=Beggiatoa alba B18LD RepID=I3CJX0_9GAMM
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;"
general secretion pathway protein GspK
ar4r2_scaffold_1785_12
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12575..13318)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H6Y2_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM68253.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
xcpW; general secretion pathway protein J
Displaying 12 items

View Taxonomy