ggKbase home page

ar4r2_scaffold_626

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_626_1
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C4N4_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ38577.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
ar4r2_scaffold_626_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(386..1018)
DNA (633bp) protein (211aa)
Putative membrane protein id=1825129 bin=GWD2_Bacteroidetes_40_43 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
ar4r2_scaffold_626_3
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1110..2096
DNA (987bp) protein (329aa)
GSCFA domain protein id=4190402 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_626_4
unknown

Not on your lists

comp(2122..2547)
DNA (426bp) protein (142aa)

This feature has no annotations

ar4r2_scaffold_626_5
unknown

Not on your lists

comp(2562..2945)
DNA (384bp) protein (128aa)

This feature has no annotations

ar4r2_scaffold_626_6
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3022..3873
DNA (852bp) protein (284aa)
putative peptidyl-prolyl cis-trans isomerase id=4976737 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
peptidylprolyl isomerase
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_626_7
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3878..4465
DNA (588bp) protein (196aa)
putative transcriptional regulator id=2016755 bin=GWD2_Bacteroidetes_33_33 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
putative transcriptional regulator
Tax=GWD2_Bacteroidetes_33_33_curated
ar4r2_scaffold_626_8

Not on your lists

4539..5381
DNA (843bp) protein (281aa)
Marine sediment metagenome DNA, contig: S01H1_S21256 {ECO:0000313|EMBL:GAG25228.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PKD domain containing protein id=4478479 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
PKD domain-containing protein
ar4r2_scaffold_626_9
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

5391..6155
DNA (765bp) protein (255aa)
Lipopolysaccharide biosynthesis glycosyltransferase id=4289285 bin=GWF2_Bacteroidetes_29_10 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes rbh
waaE; lipopolysaccharide core biosynthesis glycosyl transferase
Tax=CG_Bacteroid_02
ar4r2_scaffold_626_10
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6152..7156
DNA (1005bp) protein (335aa)
Glycosyl transferase family 9 id=2596450 bin=GWF2_Bacteroidetes_38_335 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
glycosyl transferase family protein
Tax=GWF2_Bacteroidetes_38_335_curated
ar4r2_scaffold_626_11
unknown

Not on your lists

comp(7136..7468)
DNA (333bp) protein (111aa)

This feature has no annotations

ar4r2_scaffold_626_12
unknown

Not on your lists

comp(7473..7616)
DNA (144bp) protein (48aa)

This feature has no annotations

ar4r2_scaffold_626_13
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7846..8739)
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=3691968 bin=GWF2_Bacteroidetes_33_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9b_curated
ar4r2_scaffold_626_14
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8792..10246)
DNA (1455bp) protein (485aa)
alkyl hydroperoxide reductase id=4161773 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
alkyl hydroperoxide reductase rbh
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_626_15
unknown

Not on your lists

comp(10376..10576)
DNA (201bp) protein (67aa)

This feature has no annotations

ar4r2_scaffold_626_16
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10578..12107)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein id=4414359 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_626_17
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(12101..13378)
DNA (1278bp) protein (426aa)
Putative Zn-dependent peptidase id=2594253 bin=GWF2_Bacteroidetes_38_335 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
peptidase M16 domain-containing protein rbh
Tax=CG_Bacteroid_01
ar4r2_scaffold_626_18
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13375..14640)
DNA (1266bp) protein (422aa)
peptidase M16 domain-containing protein id=4224402 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
putative Zn-dependent peptidase rbh
Tax=GWF2_Bacteroidetes_35_48_curated
ar4r2_scaffold_626_19
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14664..15617)
DNA (954bp) protein (318aa)
Putative dioxygenase n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U4W9_CROAH rbh
dioxygenase rbh
Tax=GWA2_Bacteroidetes_30_7_curated
ar4r2_scaffold_626_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15791..16381
DNA (591bp) protein (197aa)
lema family protein id=2619926 bin=GWA2_Bacteroidetes_42_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
ar4r2_scaffold_626_21
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16456..16893
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002F24EBB
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9b_curated
ar4r2_scaffold_626_22
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16927..17727
DNA (801bp) protein (267aa)
hypothetical protein MsalJ2_13653 id=2376991 bin=GWA2_Bacteroidetes_33_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
ar4r2_scaffold_626_23
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17751..18467)
DNA (717bp) protein (239aa)
molecular chaperone DnaJ id=1811909 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
molecular chaperone DnaJ
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_626_trna_1
unknown

Not on your lists

comp(18569..18639)
DNA (71bp)
transferRNA Gln
ar4r2_scaffold_626_24
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18941..19834
DNA (894bp) protein (298aa)
Helix-turn-helix domain protein id=3770456 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
helix-turn-helix domain-containing protein rbh
Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_626_25
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20067..20444
DNA (378bp) protein (126aa)
Tax=RBG_13_Bacteroidetes_46_8_curated
ar4r2_scaffold_626_26
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20507..21220)
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=4085995 bin=GWF2_Bacteroidetes_38_335 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
peptidase
Tax=GWF2_Bacteroidetes_38_335_curated
ar4r2_scaffold_626_27
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21414..22289
DNA (876bp) protein (292aa)
Putative uncharacterized protein id=3692297 bin=GWF2_Bacteroidetes_33_16 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
purine or other phosphorylase family 1 rbh
Tax=GWE2_Bacteroidetes_32_14_curated
ar4r2_scaffold_626_28
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22396..23265
DNA (870bp) protein (290aa)
hypothetical protein AnHS1_04136 id=3807304 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_626_29
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23269..24396)
DNA (1128bp) protein (376aa)
rfaG; a-glycosyltransferase (EC:2.4.1.-) rbh
A-glycosyltransferase, glycosyltransferase family 4 protein id=3979295 bin=GWF2_Bacteroidetes_33_16 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
Tax=GWE2_Bacteroidetes_32_14_curated
Displaying items 1-30 of 35 in total

View Taxonomy