ggKbase home page

ar4r2_scaffold_734

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_734_1
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 10230 RepID=H1GKQ9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO09650.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
transposase, IS30 family
ar4r2_scaffold_734_trna_2
unknown

Not on your lists

comp(970..1041)
DNA (72bp)
transferRNA Met
ar4r2_scaffold_734_2
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1114..1611)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLH0_9FLAO
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
ar4r2_scaffold_734_trna_1
unknown

Not on your lists

comp(1688..1760)
DNA (73bp)
transferRNA Lys
ar4r2_scaffold_734_3
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1883..3052
DNA (1170bp) protein (390aa)
Adenylate kinase id=2277583 bin=GWB2_Bacteroidetes_32_14 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
adenylate kinase rbh
Tax=GWD2_Bacteroidetes_33_33_curated
ar4r2_scaffold_734_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3109..4320)
DNA (1212bp) protein (404aa)
Alanine dehydrogenase id=4108778 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
alanine dehydrogenase rbh
Tax=GWF2_Bacteroidetes_33_38_curated
ar4r2_scaffold_734_5
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4362..5522)
DNA (1161bp) protein (387aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47) rbh
8-amino-7-oxononanoate synthase id=2995200 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
Tax=GWF2_Bacteroidetes_35_48_curated
ar4r2_scaffold_734_6
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5940..8417
DNA (2478bp) protein (826aa)
Putative uncharacterized protein id=4245605 bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
hypothetical protein rbh
Tax=GWF2_Bacteroidetes_35_48_curated
ar4r2_scaffold_734_7
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8554..9825
DNA (1272bp) protein (424aa)
DNA/RNA helicase, superfamily II n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R4L2_OWEHD rbh
DNA/RNA helicase rbh
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AEV32101.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
ar4r2_scaffold_734_8
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9880..11214
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037B81E7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII50411.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
ar4r2_scaffold_734_9
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

11225..11767
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI000360D9EB
Tax=CG_Bacteroid_02
ar4r2_scaffold_734_10
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11813..14236
DNA (2424bp) protein (808aa)
Outer membrane receptor for ferrienterochelin and colicins id=4655336 bin=GWF2_Bacteroidetes_35_48 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
TonB-dependent receptor
Tax=GWF2_Bacteroidetes_35_48_curated
ar4r2_scaffold_734_11
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

14236..15519
DNA (1284bp) protein (428aa)
Glycosyl transferase, group 1 id=2003487 bin=GWD2_Bacteroidetes_33_33 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 rbh
group 1 glycosyl transferase rbh
Tax=CG_Bacteroid_02
ar4r2_scaffold_734_12
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15576..16448
DNA (873bp) protein (291aa)
Sulfotransferase domain protein {ECO:0000313|EMBL:KHE90871.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
ar4r2_scaffold_734_13
unknown

Not on your lists

16458..17168
DNA (711bp) protein (237aa)

This feature has no annotations

ar4r2_scaffold_734_14
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

17190..18665
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000378C81D rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EHO42405.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
polysaccharide biosynthesis protein
ar4r2_scaffold_734_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18670..19434)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000059-L03 RepID=UPI00036AB986
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA56496.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
ar4r2_scaffold_734_16
Helicobacter cinaedi, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19424..20101)
DNA (678bp) protein (226aa)
methyltransferase type 11 (EC:2.1.1.-)
Methyltransferase type 11 {ECO:0000313|EMBL:BAM32594.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAM32594.1};; TaxID=1206745 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter cinaedi ATCC BAA-847.;"
Methyltransferase domain protein n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=E4VN82_9HELI
ar4r2_scaffold_734_17
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20105..21463)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC51
Uncharacterized protein {ECO:0000313|EMBL:GAO29729.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
ar4r2_scaffold_734_18
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21463..22656)
DNA (1194bp) protein (398aa)
glycosyltransferase (EC:2.4.1.-)
group 1 glycosyl transferase id=3831347 bin=GWF2_Bacteroidetes_41_31 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Tax=GWF2_Bacteroidetes_41_31_curated
ar4r2_scaffold_734_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(22675..23520)
DNA (846bp) protein (282aa)
Methyltransferase FkbM family n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTD2_VULDI
FkbM family methyltransferase
Tax=RBG_13_Pacearchaeota_36_9_curated
ar4r2_scaffold_734_20
unknown

Not on your lists

23524..23670
DNA (147bp) protein (49aa)

This feature has no annotations

ar4r2_scaffold_734_21
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23932..24804
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=4011069 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_734_22
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24906..25727
DNA (822bp) protein (274aa)
Transketolase domain-containing protein id=4534978 bin=GWF2_Bacteroidetes_35_48 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
transketolase rbh
Tax=GWF2_Bacteroidetes_35_48_curated
ar4r2_scaffold_734_23
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25728..26462
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A id=1933823 bin=GWB2_Bacteroidetes_32_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
pseudouridine synthase
Tax=GWA2_Bacteroidetes_31_9b_curated
Displaying 25 items

View Taxonomy