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ar4r2_scaffold_1318

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1318_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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3..389
DNA (387bp) protein (129aa)
Transposase, IS5 family id=4490152 bin=GWC2_Bacteroidetes_46_850 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
transposase, IS5 family
Tax=GWC2_Bacteroidetes_46_850_curated
ar4r2_scaffold_1318_2
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(575..2848)
DNA (2274bp) protein (758aa)
Putative immunoreactive 84 kDa antigen PG93 id=4574118 bin=GWF2_Bacteroidetes_38_335 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
ar4r2_scaffold_1318_3
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2971..3444
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3UBP0_CROAH
hypothetical protein
ar4r2_scaffold_1318_4
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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comp(3541..3762)
DNA (222bp) protein (74aa)
Uncharacterized protein id=3562231 bin=GWF2_Bacteroidetes_41_9 species=Bacteroides helcogenes genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
ar4r2_scaffold_1318_5
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3887..4405)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00035CF979
Uncharacterized protein {ECO:0000313|EMBL:KJF44279.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
ar4r2_scaffold_1318_6
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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4481..5320
DNA (840bp) protein (280aa)
Universal stress protein UspA-like protein id=3243626 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
universal stress protein UspA-like protein
Tax=GWF2_Bacteroidetes_35_48_curated
ar4r2_scaffold_1318_7
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5367..6056)
DNA (690bp) protein (230aa)
Inorganic diphosphatase (EC:3.6.1.1) rbh
inorganic pyrophosphatase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CD78 rbh
Inorganic pyrophosphatase {ECO:0000313|EMBL:GAF02941.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
ar4r2_scaffold_1318_8
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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6228..9137
DNA (2910bp) protein (970aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD id=1880658 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
Tax=GWA2_Bacteroidetes_32_17_curated
ar4r2_scaffold_1318_9
Caldithrix abyssi, Caldithrix, Bacteria

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comp(9235..9648)
DNA (414bp) protein (138aa)
Threonyl-tRNA synthetase editing domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XW68_9BACT
Threonyl-tRNA synthetase editing domain-containing protein {ECO:0000313|EMBL:EHO42973.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
ar4r2_scaffold_1318_10
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9659..11785)
DNA (2127bp) protein (709aa)
RNA-binding protein id=3854171 bin=GWF2_Bacteroidetes_38_335 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
RNA-binding protein
Tax=GWF2_Bacteroidetes_38_335_curated
ar4r2_scaffold_1318_11
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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11909..12499
DNA (591bp) protein (197aa)
Transcriptional regulator id=3990908 bin=GWF2_Bacteroidetes_38_335 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
TetR family transcriptional regulator
Tax=GWF2_Bacteroidetes_38_335_curated
ar4r2_scaffold_1318_12
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12501..13640
DNA (1140bp) protein (380aa)
Putative uncharacterized protein id=3990909 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
ar4r2_scaffold_1318_13
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13772..14683)
DNA (912bp) protein (304aa)
Sodium bile acid symporter family id=2174383 bin=GWB2_Bacteroidetes_32_14 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
ar4r2_scaffold_1318_14
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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14793..16538
DNA (1746bp) protein (582aa)
Site-specific recombinase XerD n=2 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AFK6_FLELS rbh
site-specific recombinase XerD rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:AFM02741.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
ar4r2_scaffold_1318_15
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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16591..17118
DNA (528bp) protein (176aa)
NGN domain protein id=4182568 bin=GWF2_Bacteroidetes_33_16 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
NusG antitermination factor
Tax=GWE2_Bacteroidetes_32_14_curated
Displaying 15 items

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