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ar4r2_scaffold_786

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_786_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299..2293)
DNA (1995bp) protein (665aa)
UvrABC system protein B n=1 Tax=Beggiatoa alba B18LD RepID=I3CHH9_9GAMM rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
excinuclease ABC subunit B
ar4r2_scaffold_786_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2316..4703)
DNA (2388bp) protein (796aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XYT5_STAC7 rbh
exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:BAP55232.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_786_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4888..7053
DNA (2166bp) protein (722aa)
TonB-dependent receptor n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z8_NITHN
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADE14555.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
ar4r2_scaffold_786_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7160..8716)
DNA (1557bp) protein (519aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) rbh
PAS domain S-box n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS9_9GAMM rbh
PAS domain S-box {ECO:0000313|EMBL:EIJ42472.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_786_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8706..10937)
DNA (2232bp) protein (744aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Signal transduction histidine kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CFT0_9GAMM rbh
multi-sensor hybrid histidine kinase
ar4r2_scaffold_786_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10961..11542)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CF33_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42226.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_786_7
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11869..13374
DNA (1506bp) protein (502aa)
Glycosyl transferase group 1 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TXB8_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY86806.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
ar4r2_scaffold_786_8
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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13337..16630
DNA (3294bp) protein (1098aa)
Putative glycosyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T033_9CYAN
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AFY75526.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
ar4r2_scaffold_786_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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17068..17538
DNA (471bp) protein (157aa)
CheW protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DAU3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD08063.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
ar4r2_scaffold_786_10
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17557..17877
DNA (321bp) protein (107aa)
Sulfur/thiosulfate oxidation protein SoxZ n=1 Tax=Beggiatoa sp. PS RepID=A7BZ97_9GAMM
Sulfur/thiosulfate oxidation protein SoxZ {ECO:0000313|EMBL:EDN68139.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
sulfur/thiosulfate oxidation protein SoxZ
ar4r2_scaffold_786_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18041..22144)
DNA (4104bp) protein (1368aa)
glycosyl transferase family 2 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B7A687 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDH44085.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
glycosyl transferase rbh
ar4r2_scaffold_786_12
R_Chlamydiae_49_11, Chlamydiae, Bacteria

Not on your lists

22147..23631
DNA (1485bp) protein (495aa)
WsaE n=1 Tax=Geobacillus stearothermophilus RepID=Q7BG51_GEOSE
glycosyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_11_curated
ar4r2_scaffold_786_13
unknown

Not on your lists

23643..25901
DNA (2259bp) protein (753aa)
protease n=1 Tax=Nevskia ramosa RepID=UPI0003B37DFC
Na-Ca exchanger/integrin-beta4
ar4r2_scaffold_786_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25916..28162
DNA (2247bp) protein (749aa)
protease n=1 Tax=Nevskia ramosa RepID=UPI0003B37DFC
Uncharacterized protein {ECO:0000313|EMBL:KHD03937.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ar4r2_scaffold_786_15
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28254..28766)
DNA (513bp) protein (171aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Beggiatoa alba B18LD RepID=I3CJM2_9GAMM
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EIJ43815.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
polyhydroxyalkonate synthesis repressor, PhaR
ar4r2_scaffold_786_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28868..30046)
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CJM3_9GAMM rbh
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:BAP55136.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_786_17
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30338..31306)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CGE3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42686.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_786_18
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31669..33246
DNA (1578bp) protein (526aa)
YD repeat-containing protein id=12498182 bin=THIO_MID species=Kiloniella laminariae genus=Kiloniella taxon_order=Kiloniellales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KGE85503.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
RHS Repeat family protein
ar4r2_scaffold_786_19
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33293..34243
DNA (951bp) protein (317aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;"
DNA methylase N-4/N-6 domain protein n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JBD7_9BURK rbh
DNA modification methylase rbh
ar4r2_scaffold_786_20
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34240..34815
DNA (576bp) protein (192aa)
Restriction endonuclease BglII n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JBD8_9BURK
Restriction endonuclease BglII {ECO:0000313|EMBL:CCD30092.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;"
Restriction endonuclease BglII
ar4r2_scaffold_786_21
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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34831..36210
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SKQ0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD94777.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
exported hypothetical protein rbh
ar4r2_scaffold_786_22
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(36258..36791)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8D8_THIV6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF73556.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
hypothetical protein rbh
ar4r2_scaffold_786_23
unknown

Not on your lists

37375..37557
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 23 items

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