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ar4r2_scaffold_656

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_656_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..409)
DNA (408bp) protein (136aa)
Archaeal ATPase n=1 Tax=Beggiatoa sp. PS RepID=A7BTV8_9GAMM
Archaeal ATPase {ECO:0000313|EMBL:EDN70029.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_656_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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855..5423
DNA (4569bp) protein (1523aa)
glutamate synthase n=1 Tax=Methylococcus capsulatus RepID=UPI00035C5F25 rbh
glutamate synthase
Glutamate synthase {ECO:0000313|EMBL:BAP58025.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(5540..6520)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00038045F0 rbh
DNA methylase N-4/N-6 domain-containing protein rbh
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ar4r2_scaffold_656_4
R_RIF_OP11_01_40_20, RIF-OP11-1, Microgenomates, Bacteria

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comp(6517..7485)
DNA (969bp) protein (323aa)
Putative uncharacterized protein id=4536930 bin=GWF2_Ignavibacteria_35_20 species=Capnocytophaga sp. oral taxon 326 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated
ar4r2_scaffold_656_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7765..8379)
DNA (615bp) protein (205aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCQ4_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:BAP57064.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..9239)
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Endonuclease III n=1 Tax=Beggiatoa alba B18LD RepID=I3CGK3_9GAMM rbh
endonuclease III
ar4r2_scaffold_656_7
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9355..10473)
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
DNA polymerase III subunit beta n=1 Tax=Beggiatoa sp. PS RepID=A7C334_9GAMM rbh
DNA polymerase III, beta chain
ar4r2_scaffold_656_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10516..12405)
DNA (1890bp) protein (630aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Biosynthetic arginine decarboxylase n=1 Tax=Beggiatoa alba B18LD RepID=U5FCD9_9GAMM rbh
arginine decarboxylase
ar4r2_scaffold_656_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12468..13256)
DNA (789bp) protein (263aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Beggiatoa sp. PS RepID=A7BW52_9GAMM rbh
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:KHD10812.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
endonuclease/exonuclease/phosphatase
ar4r2_scaffold_656_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13270..15972)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1Y4_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55346.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15975..16421)
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55345.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16989..24275
DNA (7287bp) protein (2429aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BT48_9GAMM rbh
conserved repeat protein
Conserved repeat protein {ECO:0000313|EMBL:BAP54557.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_656_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24389..24676
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CBL4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41007.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_656_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24988..27672
DNA (2685bp) protein (895aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Beggiatoa alba B18LD RepID=I3CBF0_9GAMM rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
UTP-GlnB uridylyltransferase, GlnD
ar4r2_scaffold_656_15
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27912..28211
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BY00_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD06958.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
Displaying 15 items

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