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ar4r2_scaffold_936

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_936_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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1..651
DNA (651bp) protein (217aa)
Transposase, IS4 n=2 Tax=Acinetobacter RepID=U4Q6J6_9GAMM
Transposase {ECO:0000313|EMBL:CDH44240.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Transposase
ar4r2_scaffold_936_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(667..1605)
DNA (939bp) protein (313aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero-beta-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Beggiatoa sp. PS RepID=A7BUK6_9GAMM rbh
ADP-L-glycero-D-manno-heptose-6-epimerase
ar4r2_scaffold_936_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1602..3014)
DNA (1413bp) protein (471aa)
Bifunctional protein HldE n=1 Tax=Beggiatoa alba B18LD RepID=I3CHA0_9GAMM rbh
bifunctional protein hldE
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_4
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3048..3539)
DNA (492bp) protein (164aa)
Lipoprotein n=1 Tax=Beggiatoa sp. PS RepID=A7BTG9_9GAMM
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
lipoprotein
ar4r2_scaffold_936_5
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3769..5076
DNA (1308bp) protein (436aa)
Sulfotransferase domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QJQ6_9CYAN rbh
Sulfotransferase domain protein {ECO:0000313|EMBL:ERT08199.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
sulfotransferase
ar4r2_scaffold_936_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5073..5555
DNA (483bp) protein (161aa)
Hydrogenase expression/formation protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH10_AZOSU
Ni,Fe-hydrogenase maturation factor
Ni,Fe-hydrogenase maturation factor {ECO:0000313|EMBL:BAP57889.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5559..6173)
DNA (615bp) protein (205aa)
ABC-type uncharacterized transport system, auxiliary component n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS1_9GAMM
ABC-type uncharacterized transport system, auxiliary component
ABC-type uncharacterized transport system, auxiliary component {ECO:0000313|EMBL:BAP54897.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6176..7441)
DNA (1266bp) protein (422aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS0_9GAMM
ABC-type transport system involved in resistance to organic solvents, periplasmic component
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:BAP54896.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7455..8192)
DNA (738bp) protein (246aa)
Probable S-methyl-5'-thioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEV4_9GAMM rbh
5''-deoxy-5''-methylthioadenosine phosphorylase
ar4r2_scaffold_936_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8189..8749)
DNA (561bp) protein (187aa)
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Beggiatoa sp. PS RepID=A7BX19_9GAMM
hypoxanthine-guanine phosphoribosyltransferase
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:BAP54499.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8890..9393)
DNA (504bp) protein (168aa)
Transmembrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C3K9_9GAMM
Membrane protein {ECO:0000313|EMBL:KHD08434.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
transmembrane protein
ar4r2_scaffold_936_12

Not on your lists

9652..10086
DNA (435bp) protein (145aa)
Transposase, IS630 family n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CQ7_9ARCH
Transposase, IS630 family {ECO:0000313|EMBL:AAU82820.1}; TaxID=286721 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos1D1.;"
transposase
ar4r2_scaffold_936_13
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10104..10646
DNA (543bp) protein (181aa)
Transposase n=1 Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JVE1_MICAN
transposase
Transposase {ECO:0000313|EMBL:BAG01475.1}; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (strain NIES-843).;"
ar4r2_scaffold_936_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10865..11491
DNA (627bp) protein (209aa)
50S ribosomal protein L25 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIB1_9GAMM
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_15
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11498..12061
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Beggiatoa alba B18LD RepID=I3CIB0_9GAMM
ar4r2_scaffold_936_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12152..16234
DNA (4083bp) protein (1361aa)
Glycosyltransferase n=1 Tax=Beggiatoa sp. PS RepID=A7BTM7_9GAMM rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAP55437.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_17
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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16866..18725
DNA (1860bp) protein (620aa)
acetolactate synthase large subunit (EC:2.2.1.6) rbh
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YM71_9DELT rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_936_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19266..20228
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CI23_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55491.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_936_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..21172
DNA (933bp) protein (311aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Beggiatoa alba B18LD RepID=I3CJD9_9GAMM rbh
UDP-N-acetylenolpyruvoylglucosamine reductase
ar4r2_scaffold_936_20
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21395..22486)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BTR4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70074.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
TonB-dependent receptor
ar4r2_scaffold_936_21
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22542..23105
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) RepID=D3VJN1_XENNA
Transposase
Transposase {ECO:0000313|EMBL:CEF30029.1}; TaxID=1437826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila str. Websteri.;"
Displaying 21 items

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