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ar4r2_scaffold_2266

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2266_1
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(151..909)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360CFC2
hypothetical protein
Tax=RBG_13_Bacteroidetes_43_22_curated
ar4r2_scaffold_2266_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(949..2706)
DNA (1758bp) protein (586aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Beggiatoa alba B18LD RepID=I3CHG6_9GAMM rbh
ATP-binding protein
ar4r2_scaffold_2266_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2709..3914)
DNA (1206bp) protein (402aa)
Type II secretion system protein L n=1 Tax=Beggiatoa alba B18LD RepID=I3CI50_9GAMM
general secretion pathway protein L
Type II secretion system protein L {ECO:0000256|PIRNR:PIRNR015761}; Short=T2SS protein L {ECO:0000256|PIRNR:PIRNR015761};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2266_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3919..5316)
DNA (1398bp) protein (466aa)
UbiA prenyltransferase family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BZN7_9GAMM rbh
UbiA prenyltransferase family protein
UbiA prenyltransferase family protein {ECO:0000313|EMBL:BAP57349.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2266_5
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5313..9209)
DNA (3897bp) protein (1299aa)
nrsC; non-ribosomal peptide synthetase NrsC (EC:5.1.1.11) rbh
Non-ribosomal peptide synthase, PvdD/PvdJ-like protein n=2 Tax=Paenibacillus polymyxa RepID=E3EE54_PAEPS rbh
Peptide synthetase {ECO:0000313|EMBL:ADO54977.1}; TaxID=886882 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa).;"
ar4r2_scaffold_2266_6
unknown

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comp(9306..9746)
DNA (441bp) protein (147aa)

This feature has no annotations

ar4r2_scaffold_2266_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9891..10565)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q608H8_METCA rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ar4r2_scaffold_2266_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11056..11352
DNA (297bp) protein (99aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Methionine--tRNA ligase n=1 Tax=Methylophaga lonarensis MPL RepID=M7PDT5_9GAMM
methionyl-tRNA synthetase
Displaying 8 items

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