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ar4r2_scaffold_2629

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2629_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

ar4r2_scaffold_2629_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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830..2857
DNA (2028bp) protein (676aa)
TonB-dependent receptor n=1 Tax=Beggiatoa sp. PS RepID=A7BY45_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EDN68539.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
TonB-dependent receptor, plug rbh
ar4r2_scaffold_2629_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2878..4173
DNA (1296bp) protein (432aa)
Chaperone SurA n=1 Tax=Beggiatoa alba B18LD RepID=I3CKQ9_9GAMM rbh
molecular chaperone SurA
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2629_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4392..5138
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein BegalDRAFT_3274 n=1 Tax=Beggiatoa alba B18LD RepID=I3CKF0_9GAMM rbh
Probable transcriptional regulatory protein BegalDRAFT_3274 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein rbh
ar4r2_scaffold_2629_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5151..5441
DNA (291bp) protein (97aa)
UPF0235 protein BGP_4566 n=1 Tax=Beggiatoa sp. PS RepID=A7C0Z9_9GAMM
UPF0235 protein OT06_43535 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
ar4r2_scaffold_2629_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5445..6092
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BR28_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56368.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2629_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6086..8299)
DNA (2214bp) protein (738aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Beggiatoa alba B18LD RepID=I3CBT4_9GAMM rbh
nickel-iron hydrogenase, carbamoyltransferase maturation factor
Nickel-iron hydrogenase, carbamoyltransferase maturation factor {ECO:0000313|EMBL:BAP57510.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2629_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8302..9630)
DNA (1329bp) protein (443aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
RNA methyltransferase TrmA family (EC:2.1.1.-)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Beggiatoa alba B18LD RepID=I3CHH2_9GAMM rbh
ar4r2_scaffold_2629_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10318..12624)
DNA (2307bp) protein (769aa)
Sensor histidine kinase/response regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BXF0_9GAMM rbh
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:BAP55317.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2629_10
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13155..14159
DNA (1005bp) protein (335aa)
von Willebrand factor type A-like protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CKL7_9GAMM
von Willebrand factor type A-like protein {ECO:0000313|EMBL:EIJ44160.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
von Willebrand factor type A
ar4r2_scaffold_2629_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14320..14523)
DNA (204bp) protein (68aa)
transposase IS605
Transposase IS605 {ECO:0000313|EMBL:BAP54457.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2629_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14593..14970)
DNA (378bp) protein (126aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Moorea producens 3L RepID=F4XSH6_9CYAN
transposase IS605
Transposase IS605 {ECO:0000313|EMBL:BAP54457.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Displaying 12 items

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