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ar4r2_scaffold_1428

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1428_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..652)
DNA (651bp) protein (217aa)
Transposase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SLB7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CDH45540.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
ar4r2_scaffold_1428_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(649..1698)
DNA (1050bp) protein (350aa)
Two-component hybrid sensor and regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BYL9_9GAMM
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EDN68365.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
two-component hybrid sensor and regulator
ar4r2_scaffold_1428_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1701..5402)
DNA (3702bp) protein (1234aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Signal Transduction Histidine Kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BQL3_9GAMM rbh
signal transduction histidine kinase
ar4r2_scaffold_1428_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5530..6474)
DNA (945bp) protein (315aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ81_9GAMM rbh
serine kinase of the HPr protein
ar4r2_scaffold_1428_5
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6484..6951)
DNA (468bp) protein (156aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Beggiatoa sp. PS RepID=A7C005_9GAMM
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EDN67877.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
PTS IIA-like nitrogen-regulatory protein PtsN
ar4r2_scaffold_1428_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7085..7414)
DNA (330bp) protein (110aa)
Ribosomal subunit interface protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ79_9GAMM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIJ43672.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ribosomal subunit interface protein
ar4r2_scaffold_1428_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7491..9005)
DNA (1515bp) protein (505aa)
RNA polymerase sigma-54 factor n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ78_9GAMM rbh
DNA-directed RNA polymerase specialized sigma subunit, sigma54
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1428_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9169..9897)
DNA (729bp) protein (243aa)
ABC transporter, ATP-binding protein n=1 Tax=Beggiatoa sp. PS RepID=A7BRV4_9GAMM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN70724.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ABC transporter ATP-binding protein
ar4r2_scaffold_1428_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9900..10421)
DNA (522bp) protein (174aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ76_9GAMM
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
OstA-like protein
ar4r2_scaffold_1428_10
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10396..10959)
DNA (564bp) protein (188aa)
Protein containing DUF1239 n=1 Tax=Beggiatoa sp. PS RepID=A7BRV6_9GAMM
Protein containing DUF1239 {ECO:0000313|EMBL:EDN70726.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_1428_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11413..14079)
DNA (2667bp) protein (889aa)
Methyl-accepting chemotaxis protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CL18_9GAMM rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EIJ44311.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
methyl-accepting chemotaxis protein
ar4r2_scaffold_1428_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14307..14792)
DNA (486bp) protein (162aa)
Chemotaxis signal transduction protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFP0_9GAMM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EIJ42433.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
chemotaxis protein CheW
ar4r2_scaffold_1428_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14804..17164)
DNA (2361bp) protein (787aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Chemotaxis protein histidine kinase-like protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFN9_9GAMM rbh
chemotaxis protein histidine kinase CheA
ar4r2_scaffold_1428_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17171..17287)
DNA (117bp) protein (39aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Beggiatoa alba B18LD RepID=I3CFN8_9GAMM
Fis family transcriptional regulator
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIJ42431.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Displaying 14 items

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