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ar4r2_scaffold_742

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_742_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..593
DNA (591bp) protein (197aa)
Rhs family protein n=1 Tax=Beggiatoa sp. PS RepID=A7C0Y3_9GAMM
Rhs family protein {ECO:0000313|EMBL:EDN67551.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
RHS repeat-associated core domain-containing protein
ar4r2_scaffold_742_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(762..1793)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Beggiatoa alba B18LD RepID=I3CGS2_9GAMM rbh
holliday junction DNA helicase, RuvB subunit
ar4r2_scaffold_742_3
unknown

Not on your lists

comp(2112..3197)
DNA (1086bp) protein (362aa)

This feature has no annotations

ar4r2_scaffold_742_4
unknown

Not on your lists

comp(3194..4225)
DNA (1032bp) protein (344aa)

This feature has no annotations

ar4r2_scaffold_742_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4332..4724
DNA (393bp) protein (131aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GHW7_METAL
transcription factor, MBF1
Transcription factor, MBF1 {ECO:0000313|EMBL:BAP55089.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_742_6
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4829..5407
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E5D2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV28844.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
ar4r2_scaffold_742_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5397..5819)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CE89_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41932.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_742_8
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5864..6190)
DNA (327bp) protein (109aa)
ferredoxin n=1 Tax=Methylobacter marinus RepID=UPI000379FB51
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:GAO34544.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
(2Fe-2S) ferredoxin
ar4r2_scaffold_742_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6218..6544)
DNA (327bp) protein (109aa)
Ferredoxin III, nif-specific n=1 Tax=Beggiatoa alba B18LD RepID=I3CDK6_9GAMM
Ferredoxin III, nif-specific {ECO:0000313|EMBL:EIJ41699.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ferredoxin
ar4r2_scaffold_742_10
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6595..6810)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CDK7_9GAMM
hypothetical protein
Tax=CG_Mariprof_02
ar4r2_scaffold_742_11
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6820..7293)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034D4F06
nitrogen fixation protein
Tax=CG_Mariprof_02
ar4r2_scaffold_742_12
unknown

Not on your lists

comp(7666..8292)
DNA (627bp) protein (209aa)

This feature has no annotations

ar4r2_scaffold_742_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8499..8972)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UGF8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57047.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_742_14
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

comp(9091..9510)
DNA (420bp) protein (140aa)
Uncharacterized protein id=1268069 bin=GWE1_Spirochaetes_32_154 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
Tax=GWE2_Spirochaetes_31_10_curated
ar4r2_scaffold_742_15
unknown

Not on your lists

comp(9604..9834)
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_742_16
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9890..12886)
DNA (2997bp) protein (999aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
Putative Sensor protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G1M8_9CYAN rbh
signal transduction histidine kinase
ar4r2_scaffold_742_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13071..13880)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCA5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP54357.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_742_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13987..14763)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DWN8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55775.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_742_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15249..16172)
DNA (924bp) protein (308aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Porphobilinogen deaminase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDA4_9GAMM rbh
porphobilinogen deaminase
ar4r2_scaffold_742_20
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16179..16745)
DNA (567bp) protein (189aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Deoxycytidine triphosphate deaminase (EC:3.5.4.13) rbh
deoxycytidine triphosphate deaminase n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036BF466 rbh
ar4r2_scaffold_742_21
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16776..17975)
DNA (1200bp) protein (400aa)
Type II secretory pathway, component PulF n=1 Tax=Beggiatoa alba B18LD RepID=I3CIA1_9GAMM rbh
type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:BAP56559.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_742_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18249..19016
DNA (768bp) protein (256aa)
Lipoprotein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BH39_9GAMM
surface lipoprotein
Surface lipoprotein {ECO:0000313|EMBL:BAP56123.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_742_23
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19184..20614)
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Beggiatoa alba B18LD RepID=I3CH77_9GAMM rbh
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
ar4r2_scaffold_742_24
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20650..22116)
DNA (1467bp) protein (489aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Beggiatoa alba B18LD RepID=I3CFI3_9GAMM rbh
inosine-5'-monophosphate dehydrogenase
ar4r2_scaffold_742_25
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22445..23311
DNA (867bp) protein (289aa)
Nucleoside phosphorylase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F4K1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99700.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
ar4r2_scaffold_742_26
unknown

Not on your lists

23332..25071
DNA (1740bp) protein (580aa)

This feature has no annotations

ar4r2_scaffold_742_27
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25201..25578
DNA (378bp) protein (126aa)
TPR repeat-containing protein n=2 Tax=Cyanothece RepID=B7K2E6_CYAP8
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACK65282.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
ar4r2_scaffold_742_28
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25982..26734
DNA (753bp) protein (251aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6U0_METMM
Chromosome partitioning protein {ECO:0000313|EMBL:KHD30777.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
Cobyrinic acid ac-diamide synthase
ar4r2_scaffold_742_29
unknown

Not on your lists

26734..27003
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 29 items

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