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ar4r2_scaffold_4667

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_4667_1

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1..549
DNA (549bp) protein (183aa)
Transposase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SUQ6_META2
Marine sediment metagenome DNA, contig: S01H1_L04945 {ECO:0000313|EMBL:GAF73392.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
ar4r2_scaffold_4667_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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699..2669
DNA (1971bp) protein (657aa)
NAD+ synthetase n=1 Tax=Beggiatoa alba B18LD RepID=I3CFR9_9GAMM rbh
NAD+ synthetase {ECO:0000313|EMBL:EIJ42462.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
NAD(+) synthetase
ar4r2_scaffold_4667_3
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(2865..4223)
DNA (1359bp) protein (453aa)
Inner membrane CreD family protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3B8CD rbh
creD; inner membrane protein CreD rbh
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
ar4r2_scaffold_4667_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4220..4822)
DNA (603bp) protein (201aa)
Nitroreductase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGG6_9GAMM
Nitroreductase {ECO:0000313|EMBL:EIJ42709.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
nitroreductase
ar4r2_scaffold_4667_5
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4884..5501)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C1F1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN67382.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_4667_6
Beggiatoa sp. SS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5538..6110)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. SS RepID=A7BKJ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN72939.1}; TaxID=422288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. SS.;"
hypothetical protein
ar4r2_scaffold_4667_7
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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6445..6894
DNA (450bp) protein (150aa)
Ubiquitin thiolesterase n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GF22_ACACA
Ubiquitin thiolesterase {ECO:0000313|EMBL:ELR11665.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
ar4r2_scaffold_4667_8
unknown

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7429..7608
DNA (180bp) protein (60aa)

This feature has no annotations

ar4r2_scaffold_4667_9
unknown

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7609..7902
DNA (294bp) protein (98aa)

This feature has no annotations

ar4r2_scaffold_4667_10
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9387..10409)
DNA (1023bp) protein (341aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Beggiatoa alba B18LD RepID=I3CL50_9GAMM rbh
aspartate-semialdehyde dehydrogenase
ar4r2_scaffold_4667_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10703..11098)
DNA (396bp) protein (132aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Beggiatoa alba B18LD RepID=I3CIH2_9GAMM
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:EIJ43415.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ABC transporter-like protein
ar4r2_scaffold_4667_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11380..12033)
DNA (654bp) protein (218aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Beggiatoa alba B18LD RepID=I3CIH2_9GAMM
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:EIJ43415.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ABC transporter
ar4r2_scaffold_4667_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12033..12779)
DNA (747bp) protein (249aa)
Cobalt ABC transporter, permease protein CbiQ n=1 Tax=Beggiatoa alba B18LD RepID=I3CIH1_9GAMM
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EIJ43414.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
cobalt ABC transporter inner membrane subunit CbiQ
ar4r2_scaffold_4667_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12845..13000)
DNA (156bp) protein (52aa)
50S ribosomal protein L33 n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KEX1_9GAMM
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_4667_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13024..13260)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B78679
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
50S ribosomal protein L28
ar4r2_scaffold_4667_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13414..14043
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00037F4204
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:BAP54981.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_4667_17
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14044..14520)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CE99_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41942.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_4667_18
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14731..14988)
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56447.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_4667_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15325..16101)
DNA (777bp) protein (259aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Succinate dehydrogenase subunit B n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A903_ALKEH rbh
succinate dehydrogenase iron-sulfur subunit
ar4r2_scaffold_4667_20
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16116..17903)
DNA (1788bp) protein (596aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CHK6_9GAMM rbh
succinate dehydrogenase/fumarate reductase, flavoprotein subunit
ar4r2_scaffold_4667_21
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17903..18286)
DNA (384bp) protein (128aa)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BPN0_9GAMM
Succinate dehydrogenase {ECO:0000313|EMBL:KHD10792.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
succinate dehydrogenase membrane anchor subunit
ar4r2_scaffold_4667_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18286..18684)
DNA (399bp) protein (133aa)
Succinate dehydrogenase, cytochrome b subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BPM9_9GAMM
Succinate dehydrogenase {ECO:0000313|EMBL:KHD10793.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
succinate dehydrogenase cytochrome b subunit
ar4r2_scaffold_4667_23
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18718..19587)
DNA (870bp) protein (290aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Moorea producens 3L RepID=F4XXI9_9CYAN
transposase IS605
Transposase IS605 {ECO:0000313|EMBL:BAP54457.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Displaying 23 items

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