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ar4r2_scaffold_1121

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1121_1
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..130
DNA (129bp) protein (43aa)
Transposase IS4 family protein n=2 Tax=Thiothrix nivea DSM 5205 RepID=I3BY03_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDS51039.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
ar4r2_scaffold_1121_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91..318)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7J9H2_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:KHD10861.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
ar4r2_scaffold_1121_3
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(318..542)
DNA (225bp) protein (75aa)
Asr2172 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YV09_NOSS1
hypothetical protein
Asr2172 protein {ECO:0000313|EMBL:BAB73871.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
ar4r2_scaffold_1121_4
unknown

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1088..1219
DNA (132bp) protein (44aa)

This feature has no annotations

ar4r2_scaffold_1121_5
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1353..1790
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BXM1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN68712.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_1121_6
unknown

Not on your lists

1780..1923
DNA (144bp) protein (48aa)

This feature has no annotations

ar4r2_scaffold_1121_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2089..2817
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CHY6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ43229.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_1121_8
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2859..3878
DNA (1020bp) protein (340aa)
Glycosyl transferase, family 9 n=1 Tax=Beggiatoa sp. PS RepID=A7C343_9GAMM rbh
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KHD05549.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
glycosyl transferase, family 9
ar4r2_scaffold_1121_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3926..7228)
DNA (3303bp) protein (1101aa)
Glycosyl transferase, family 2 n=1 Tax=Beggiatoa sp. PS RepID=A7BXP2_9GAMM rbh
glycosyl transferase, family 2
Glycosyl transferase, family 2 {ECO:0000313|EMBL:BAP54482.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7361..9658
DNA (2298bp) protein (766aa)
bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288B55F rbh
bifunctional malic enzyme oxidoreductase/phosphotransacetylase
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:BAP54760.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10246..12627
DNA (2382bp) protein (794aa)
NADH-quinone oxidoreductase, chain G n=1 Tax=Beggiatoa alba B18LD RepID=I3CGL5_9GAMM rbh
NADH-quinone oxidoreductase subunit G
NADH-quinone oxidoreductase subunit G {ECO:0000313|EMBL:BAP57251.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_12
unknown

Not on your lists

13190..13480
DNA (291bp) protein (97aa)

This feature has no annotations

ar4r2_scaffold_1121_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13796..15133)
DNA (1338bp) protein (446aa)
Conserved repeat protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CHD1_9GAMM rbh
conserved repeat protein
Conserved repeat protein {ECO:0000313|EMBL:BAP55267.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15130..16002)
DNA (873bp) protein (291aa)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Beggiatoa alba B18LD RepID=I3CGT3_9GAMM rbh
nicotinate-nucleotide pyrophosphorylase
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:BAP56649.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_15
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16011..16811)
DNA (801bp) protein (267aa)
Inositol monophosphatase n=1 Tax=Beggiatoa sp. PS RepID=A7BXK7_9GAMM rbh
Inositol monophosphatase {ECO:0000313|EMBL:EDN68729.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
inositol monophosphatase
ar4r2_scaffold_1121_16
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17034..18068
DNA (1035bp) protein (345aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Beggiatoa alba B18LD RepID=I3CG05_9GAMM rbh
S-methyl-5-thioribose-1-phosphate isomerase
ar4r2_scaffold_1121_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18258..19562
DNA (1305bp) protein (435aa)
Peptidase M24, catalytic core n=1 Tax=Beggiatoa sp. PS RepID=A7BRM2_9GAMM rbh
peptidase M24, catalytic core
Peptidase M24, catalytic core {ECO:0000313|EMBL:BAP54548.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19629..20690
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSP9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN70430.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_1121_19
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20746..22272
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CC63_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41206.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_1121_20
unknown

Not on your lists

22318..22581
DNA (264bp) protein (88aa)

This feature has no annotations

ar4r2_scaffold_1121_21
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22731..23882)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS5_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56361.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_1121_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24160..24519)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD04863.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
ar4r2_scaffold_1121_23
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24585..24947)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42466.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
roadblock/LC7 family protein
ar4r2_scaffold_1121_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25353..27461)
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034DDF0F
TPR repeat
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ar4r2_scaffold_1121_25
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27458..28006)
DNA (549bp) protein (183aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:KHD11356.1}; EC=3.1.3.45 {ECO:0000313|EMBL:KHD11356.1};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Beggiatoa sp. PS RepID=A7BRV7_9GAMM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
ar4r2_scaffold_1121_26
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28169..30697)
DNA (2529bp) protein (843aa)
Flagellar motor protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CHM4_9GAMM rbh
Flagellar motor protein {ECO:0000313|EMBL:EIJ43117.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
putative efflux system outer membrane protein rbh
ar4r2_scaffold_1121_27
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31031..32689
DNA (1659bp) protein (553aa)
Serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CD31_9GAMM
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:EIJ41524.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
response regulator receiver modulated serine phosphatase rbh
ar4r2_scaffold_1121_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32733..32969)
DNA (237bp) protein (79aa)
Transposase IS4 family protein n=2 Tax=Thiothrix nivea DSM 5205 RepID=I3BY03_9GAMM
Transposase IS4 family protein {ECO:0000313|EMBL:EIJ36246.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
transposase, IS4 family protein
Displaying 28 items

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