ggKbase home page

ar4r2_scaffold_2735

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2735_1
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1205..1522)
DNA (318bp) protein (106aa)
Dimodular non-ribosomal peptide synthetase containing condensation domain n=1 Tax=Beggiatoa sp. SS RepID=A7BL40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD06552.1}; Flags: Fragment;; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
tubC protein
ar4r2_scaffold_2735_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1604..2686)
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDG2_9GAMM rbh
glycosyl transferase, family 4
ar4r2_scaffold_2735_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2699..4180)
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Beggiatoa alba B18LD RepID=I3CG72_9GAMM rbh
UDP-N-acetylmuramyl-tripeptide synthetase
ar4r2_scaffold_2735_4
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(4225..5016)
DNA (792bp) protein (264aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
DNA methylase N-4/N-6 domain protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V6T6_THELD rbh
DNA methylase N-4/N-6 domain-containing protein rbh
ar4r2_scaffold_2735_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5125..6021
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=Beggiatoa alba B18LD RepID=I3CH53_9GAMM rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
GTP-binding protein Era
ar4r2_scaffold_2735_6
unknown

Not on your lists

6136..6579
DNA (444bp) protein (148aa)

This feature has no annotations

ar4r2_scaffold_2735_7
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6687..7322
DNA (636bp) protein (212aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Cytochrome c biogenesis ATP-binding export protein ccmA n=1 Tax=Beggiatoa sp. PS RepID=A7C2Q9_9GAMM
cytochrome c biogenesis protein CcmA
ar4r2_scaffold_2735_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7405..9177
DNA (1773bp) protein (591aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EDN68738.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDN68738.1};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Aspartate--tRNA ligase n=1 Tax=Beggiatoa sp. PS RepID=A7BXJ4_9GAMM rbh
aspartyl-tRNA synthetase
ar4r2_scaffold_2735_trna_1
unknown

Not on your lists

9421..9494
DNA (74bp)
transferRNA Pro
ar4r2_scaffold_2735_trna_2
unknown

Not on your lists

9605..9678
DNA (74bp)
transferRNA Arg
ar4r2_scaffold_2735_trna_3
unknown

Not on your lists

9696..9768
DNA (73bp)
transferRNA His
ar4r2_scaffold_2735_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9843..10661
DNA (819bp) protein (273aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Dihydropteroate synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CK85_9GAMM rbh
dihydropteroate synthase
Displaying 12 items

View Taxonomy