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ar4r2_scaffold_2818

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2818_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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262..459
DNA (198bp) protein (66aa)
Transposase, IS4 family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q0J8_9GAMM
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_2818_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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693..2756
DNA (2064bp) protein (688aa)
Cation-transporting ATPase {ECO:0000313|EMBL:EDN70688.1}; EC=3.6.3.- {ECO:0000313|EMBL:EDN70688.1};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Cation-transporting ATPase n=1 Tax=Beggiatoa sp. PS RepID=A7BRZ5_9GAMM rbh
cadmium-transporting ATPase
ar4r2_scaffold_2818_3
unknown

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2821..3072
DNA (252bp) protein (84aa)

This feature has no annotations

ar4r2_scaffold_2818_4
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3248..4327
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BT92_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70242.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_2818_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4342..5361
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKR7_9GAMM rbh
UGMP family protein
ar4r2_scaffold_2818_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5555..6172)
DNA (618bp) protein (206aa)
ABC-type Co2+ transport system, permease component n=1 Tax=Beggiatoa alba B18LD RepID=I3CEF6_9GAMM
ABC-type Co2+ transport system, permease component {ECO:0000313|EMBL:EIJ41999.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
cobalamin (vitamin B12) biosynthesis protein CbiM
ar4r2_scaffold_2818_7
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6180..6725)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I4Y4_RHOVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP69338.1}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
ar4r2_scaffold_2818_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6728..7486)
DNA (759bp) protein (253aa)
Nickel transport complex protein, NikM subunit, transmembrane n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E057_9GAMM rbh
Additional periplasmic component NikK of nickel ECF transporter {ECO:0000313|EMBL:EXJ15070.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
Co2+ ABC transporter substrate-binding protein
ar4r2_scaffold_2818_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7722..8126)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFP2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42435.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_2818_10
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8131..8829)
DNA (699bp) protein (233aa)
TIGR00730 family protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFP3_9GAMM
TIGR00730 family protein {ECO:0000313|EMBL:EIJ42436.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
decarboxylase
ar4r2_scaffold_2818_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9110..9613)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BX25_9GAMM
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:BAP58146.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2818_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9632..10111)
DNA (480bp) protein (160aa)
Chemotaxis signal transduction protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJK0_9GAMM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EIJ43793.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_2818_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10299..11813)
DNA (1515bp) protein (505aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Amidophosphoribosyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CBU4_9GAMM rbh
amidophosphoribosyltransferase
Displaying 13 items

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