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ar4r2_scaffold_2000

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2000_1
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..436
DNA (435bp) protein (145aa)
Transposase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SUQ6_META2
transposase
Transposase {ECO:0000313|EMBL:CCE22883.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
ar4r2_scaffold_2000_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(743..2428)
DNA (1686bp) protein (562aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Dihydroxy-acid dehydratase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEE4_9GAMM rbh
dihydroxy-acid dehydratase
ar4r2_scaffold_2000_3
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

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comp(2576..3385)
DNA (810bp) protein (270aa)
Serine/threonine protein phosphatase n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5VMJ6_9FIRM
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CCZ84781.1}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
serine/threonine phosphatase
ar4r2_scaffold_2000_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3939..5267
DNA (1329bp) protein (443aa)
Major Facilitator Superfamily transporter n=1 Tax=Beggiatoa alba B18LD RepID=I3CIW2_9GAMM rbh
MFS transporter
MFS transporter {ECO:0000313|EMBL:BAP57133.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2000_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5271..6785
DNA (1515bp) protein (505aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=1 Tax=Beggiatoa sp. PS RepID=A7C145_9GAMM rbh
peptidase S8 and S53, subtilisin, kexin, sedolisin
Peptidase S8 and S53, subtilisin, kexin, sedolisin {ECO:0000313|EMBL:BAP56162.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2000_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7109..10291
DNA (3183bp) protein (1061aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CK00_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ43943.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_2000_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10374..11144
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CIX8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ43571.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_2000_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11302..12759
DNA (1458bp) protein (486aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Glycogen synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDJ1_9GAMM rbh
glycogen/starch synthases, ADP-glucose type
ar4r2_scaffold_2000_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12785..13234
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ72_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56203.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2000_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13273..14394
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BST8_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55340.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2000_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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14345..15388
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BST7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN70393.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_2000_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16517..17518
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000344BE4B rbh
cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:BAP57531.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2000_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17573..18589)
DNA (1017bp) protein (339aa)
GTPase Obg n=1 Tax=Beggiatoa alba B18LD RepID=I3CI25_9GAMM rbh
GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2000_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18655..18921)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A448F
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ar4r2_scaffold_2000_15
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18940..19257)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIY3_9GAMM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
50S ribosomal protein L21
ar4r2_scaffold_2000_16
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19546..20004
DNA (459bp) protein (153aa)
Transposase n=1 Tax=Beggiatoa sp. PS RepID=A7C010_9GAMM
Transposase {ECO:0000313|EMBL:EDN67873.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
transposase
Displaying 16 items

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