name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ar4r2_scaffold_661_1 |
Not on your lists |
3..527
|
Transposase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SUQ6_META2
Marine sediment metagenome DNA, contig: S01H1_L04945 {ECO:0000313|EMBL:GAF73392.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
|
|
ar4r2_scaffold_661_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(701..1375)
|
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BV72_9GAMM
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDN69560.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ErfK/YbiS/YcfS/YnhG family protein
|
|
ar4r2_scaffold_661_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1479..2921)
|
Glutamate synthase n=1 Tax=Beggiatoa sp. PS RepID=A7BR92_9GAMM
rbh
Glutamate synthase {ECO:0000313|EMBL:EDN70935.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
glutamate synthase
|
|
ar4r2_scaffold_661_4
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3296..3634
|
Rhodanese-like protein n=1 Tax=Beggiatoa sp. PS RepID=A7C5N3_9GAMM
Rhodanese-like protein {ECO:0000313|EMBL:EDN65901.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
rhodanese domain-containing protein
|
|
ar4r2_scaffold_661_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3714..4607
|
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Cysteine synthase B n=1 Tax=Beggiatoa alba B18LD RepID=I3CHJ2_9GAMM
rbh
cysteine synthase B
|
|
ar4r2_scaffold_661_6
unknown
|
Not on your lists |
5063..5368
|
This feature has no annotations |
|
ar4r2_scaffold_661_7
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5419..5853
|
OsmC-like protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYI2_9GAMM
Peroxiredoxin {ECO:0000313|EMBL:KHD05492.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
OsmC family protein
|
|
ar4r2_scaffold_661_trna_1
unknown
|
Not on your lists |
5968..6041
|
transferRNA Met
|
|
ar4r2_scaffold_661_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6107..6925
|
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Beggiatoa sp. PS RepID=A7BRD0_9GAMM
rbh
S-adenosylmethionine decarboxylase
|
|
ar4r2_scaffold_661_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7065..8225
|
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Phosphoribosylaminoimidazole carboxylase, PurK protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CD54_9GAMM
rbh
phosphoribosylaminoimidazole carboxylase, ATPase subunit
|
|
ar4r2_scaffold_661_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8216..8728
|
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Beggiatoa sp. PS RepID=A7BS26_9GAMM
phosphoribosylaminoimidazole carboxylase catalytic subunit
|
|
ar4r2_scaffold_661_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8902..9468
|
CDP-alcohol phosphatidyltransferase n=1 Tax=Beggiatoa sp. PS RepID=A7BQR1_9GAMM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KHD11298.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
|
|
ar4r2_scaffold_661_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9609..11747)
|
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
DNA/RNA helicase, superfamily I n=1 Tax=Beggiatoa alba B18LD RepID=I3CFX3_9GAMM
rbh
DNA-dependent helicase
|
|
ar4r2_scaffold_661_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11892..15563)
|
Chemotaxis protein histidine kinase-like protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJF8_9GAMM
rbh
Chemotaxis protein histidine kinase-like protein {ECO:0000313|EMBL:EIJ43751.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
chemotaxis protein histidine kinase-like protein
|
|
ar4r2_scaffold_661_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15604..17274)
|
Hpt domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJF9_9GAMM
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55581.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
|
|
ar4r2_scaffold_661_15
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17309..19390)
|
Methyl-accepting chemotaxis protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJG0_9GAMM
rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EIJ43753.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
methyl-accepting chemotaxis protein
|
|
ar4r2_scaffold_661_16
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19832..20392)
|
Chemotaxis signal transduction protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJG1_9GAMM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EIJ43754.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
chemotaxis signal transduction protein
|
|
ar4r2_scaffold_661_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20458..20820)
|
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Beggiatoa alba B18LD RepID=I3CJG2_9GAMM
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:BAP55584.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
|
|
ar4r2_scaffold_661_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20838..21251)
|
Response regulator receiver domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7C391_9GAMM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN66743.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
pilus response regulator PilG
|
|
ar4r2_scaffold_661_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21775..23070
|
Glutamate--cysteine ligase GshA n=1 Tax=Beggiatoa sp. PS RepID=A7C2E1_9GAMM
rbh
glutamate--cysteine ligase GshA
Glutamate--cysteine ligase GshA {ECO:0000313|EMBL:BAP55587.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
|
|
ar4r2_scaffold_661_20
Beggiatoa sp. SS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23303..23611)
|
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000376F692
Methyltransferase {ECO:0000313|EMBL:EDN72113.1}; TaxID=422288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. SS.;"
putative methyltransferase
|
|
ar4r2_scaffold_661_21
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23652..25019)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Two-component hybrid sensor and regulator n=1 Tax=Beggiatoa sp. PS RepID=A7BTK2_9GAMM
signal transduction histidine kinase
|
|
ar4r2_scaffold_661_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25530..27194)
|
type II secretory pathway, component ExeA
Type II secretory pathway, component ExeA {ECO:0000313|EMBL:BAP56397.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Type II secretory pathway, component ExeA (Predicted ATPase) id=4916107 bin=GWC2_Nitrospirae-rel_56_14 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rbh
|
|
ar4r2_scaffold_661_trna_3
unknown
|
Not on your lists |
comp(27678..27748)
|
transferRNA Cys
|
|
ar4r2_scaffold_661_trna_2
unknown
|
Not on your lists |
comp(27775..27847)
|
transferRNA Gly
|
|
ar4r2_scaffold_661_23
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28158..28661
|
Uncharacterized protein n=2 Tax=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) RepID=D3VJN1_XENNA
Transposase {ECO:0000313|EMBL:CDH44240.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Transposase
|
|
ar4r2_scaffold_661_24
Beggiatoa sp. SS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28839..29534
|
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=422288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. SS.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Beggiatoa sp. SS RepID=A7BM78_9GAMM
orotidine 5'-phosphate decarboxylase
|
|
ar4r2_scaffold_661_25
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29552..30472
|
Methanol dehydrogenase regulatory protein MoxR n=1 Tax=Beggiatoa sp. PS RepID=A7C388_9GAMM
rbh
Methanol dehydrogenase regulatory protein MoxR {ECO:0000313|EMBL:EDN66747.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
methanol dehydrogenase regulatory protein MoxR
|
|
ar4r2_scaffold_661_26
unknown
|
Not on your lists |
31228..31299
|
This feature has no annotations |