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ar4r2_scaffold_2179

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2179_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(69..239)
DNA (171bp) protein (57aa)
Transposase IS4 family protein (Fragment) n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E626_9GAMM
transposase IS4
Transposase IS4 {ECO:0000313|EMBL:BAP56508.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2179_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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708..1307
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEA9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55338.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2179_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1304..1777
DNA (474bp) protein (158aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55152.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2179_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1819..2295)
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Beggiatoa sp. PS RepID=A7C166_9GAMM
molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2179_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2304..2876)
DNA (573bp) protein (191aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Ribonuclease HII n=1 Tax=Beggiatoa alba B18LD RepID=I3CCF2_9GAMM
ribonuclease HII
ar4r2_scaffold_2179_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2863..5040)
DNA (2178bp) protein (726aa)
Cell division protein FtsK n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2URU5_PSEST rbh
DNA segregation ATPase FtsK
DNA segregation ATPase FtsK {ECO:0000313|EMBL:BAP56254.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2179_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5113..6360)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CKX6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ44269.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_2179_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6353..7126)
DNA (774bp) protein (258aa)
TPR repeat containing protein n=1 Tax=Beggiatoa sp. PS RepID=A7BZ18_9GAMM
TPR repeat containing protein {ECO:0000313|EMBL:EDN68217.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
TPR repeat containing protein
ar4r2_scaffold_2179_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7136..8221)
DNA (1086bp) protein (362aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Beggiatoa alba B18LD RepID=I3CKX8_9GAMM rbh
50S rRNA methyltransferase
ar4r2_scaffold_2179_10
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8404..8835)
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Nucleoside diphosphate kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKX9_9GAMM
nucleoside diphosphate kinase
ar4r2_scaffold_2179_11
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9011..10510
DNA (1500bp) protein (500aa)
Ser/Thr protein phosphatase family protein family n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XLC1_SYNP2 rbh
Ser/Thr protein phosphatase family protein family rbh
Ser/Thr protein phosphatase family protein family {ECO:0000313|EMBL:ACA98081.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
ar4r2_scaffold_2179_12
unknown

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comp(10690..10794)
DNA (105bp) protein (35aa)

This feature has no annotations

ar4r2_scaffold_2179_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10787..11017)
DNA (231bp) protein (77aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56940.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_2179_14
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11676..11942)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037F2E8A
Toxin-antitoxin system, toxin component, Txe/YoeB family {ECO:0000313|EMBL:EPZ13813.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
ar4r2_scaffold_2179_15
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11920..12180)
DNA (261bp) protein (87aa)
Protein containing DUF172 n=1 Tax=Beggiatoa sp. PS RepID=A7C5N8_9GAMM
Protein containing DUF172 {ECO:0000313|EMBL:EDN65896.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_2179_16
unknown

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comp(12449..12517)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 16 items

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