ggKbase home page

ar4r2_scaffold_3882

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3882_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


340..1134
DNA (795bp) protein (265aa)
30S ribosomal protein S2 n=1 Tax=Beggiatoa alba B18LD RepID=I3CKD5_9GAMM rbh
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3882_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1184..2062
DNA (879bp) protein (293aa)
Elongation factor Ts n=1 Tax=Beggiatoa alba B18LD RepID=I3CKD6_9GAMM rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
translation elongation factor Ts
ar4r2_scaffold_3882_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2135..2854
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Uridylate kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CKD7_9GAMM rbh
uridylate kinase
ar4r2_scaffold_3882_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2873..3400
DNA (528bp) protein (176aa)
Molybdopterin-guanine dinucleotide biosynthesis protein MobB n=1 Tax=Beggiatoa alba B18LD RepID=I3CGP4_9GAMM
molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:BAP56184.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3882_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3449..3757)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C0K2_9GAMM
FmdB family regulatory protein
FmdB family regulatory protein {ECO:0000313|EMBL:BAP54330.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3882_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3919..4644
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUZ4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57277.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3882_7
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4905..5726
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MX91_9CYAN rbh
Uncharacterized protein {ECO:0000313|EMBL:ELS32091.1}; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
hypothetical protein rbh
ar4r2_scaffold_3882_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6050..6847)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVD8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDN69494.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_3882_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6955..7764)
DNA (810bp) protein (270aa)
Conserved hypothetical integral membrane protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CDY2_9GAMM rbh
Membrane protein {ECO:0000313|EMBL:KHD05738.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
ar4r2_scaffold_3882_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8553..9305)
DNA (753bp) protein (251aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component n=1 Tax=Beggiatoa alba B18LD RepID=I3CFU3_9GAMM
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:BAP56265.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3882_11
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9307..10266)
DNA (960bp) protein (320aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Beggiatoa sp. PS RepID=A7BU74_9GAMM rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EDN69911.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ABC-type multidrug transport system, ATPase component
ar4r2_scaffold_3882_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10259..11122)
DNA (864bp) protein (288aa)
Hydrogenase accessory protein HypB n=1 Tax=Beggiatoa alba B18LD RepID=I3CBL2_9GAMM rbh
hydrogenase accessory protein HypB
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:BAP57270.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3882_13
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11955..12512
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39V25_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31899.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
ar4r2_scaffold_3882_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12582..14909
DNA (2328bp) protein (776aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
barA; BarA (EC:2.7.13.3) rbh
Signal transduction histidine kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CFB1_9GAMM
ar4r2_scaffold_3882_15
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15278..17740
DNA (2463bp) protein (821aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Phosphorylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI69_9PROT rbh
glycogen phosphorylase
ar4r2_scaffold_3882_16
unknown

Not on your lists

comp(18006..18308)
DNA (303bp) protein (101aa)

This feature has no annotations

ar4r2_scaffold_3882_17
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18364..18831
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) RepID=D3VJN1_XENNA
Transposase
Transposase {ECO:0000313|EMBL:CEF30029.1}; TaxID=1437826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila str. Websteri.;"
Displaying 17 items

View Taxonomy