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ar4r2_scaffold_3475

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3475_1

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161..1750
DNA (1590bp) protein (530aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=uncultured bacterium RepID=K2EQM8_9BACT rbh
Mur ligase middle domain-containing protein rbh
ar4r2_scaffold_3475_trna_1
unknown

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1973..2054
DNA (82bp)
transferRNA Tyr
ar4r2_scaffold_3475_trna_2
unknown

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2093..2163
DNA (71bp)
transferRNA Gly
ar4r2_scaffold_3475_trna_3
unknown

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2197..2269
DNA (73bp)
transferRNA Thr
ar4r2_scaffold_3475_trna_4
unknown

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2392..2464
DNA (73bp)
transferRNA Trp
ar4r2_scaffold_3475_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2499..2879
DNA (381bp) protein (127aa)
Protein translocase subunit SecE n=1 Tax=Beggiatoa sp. PS RepID=A7BRI3_9GAMM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
preprotein translocase subunit SecE
ar4r2_scaffold_3475_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2883..3485
DNA (603bp) protein (201aa)
Transcription termination/antitermination protein NusG n=1 Tax=Beggiatoa alba B18LD RepID=I3CJC6_9GAMM rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
transcription antitermination protein NusG
ar4r2_scaffold_3475_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3546..3977
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Beggiatoa alba B18LD RepID=I3CJC7_9GAMM
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3475_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3979..4683
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=1 Tax=Beggiatoa alba B18LD RepID=I3CJC8_9GAMM rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
50S ribosomal protein L1
ar4r2_scaffold_3475_6
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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4833..5360
DNA (528bp) protein (176aa)
50S ribosomal protein L10 n=1 Tax=Methylovulum miyakonense RepID=UPI0003671EC9
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
ar4r2_scaffold_3475_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5435..5809
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Beggiatoa alba B18LD RepID=I3CJD0_9GAMM
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_3475_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6189..7868
DNA (1680bp) protein (560aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Beggiatoa alba B18LD RepID=I3CJD1_9GAMM
DNA-directed RNA polymerase subunit beta
Displaying 12 items

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