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ar4r2_scaffold_852

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_852_1
unknown

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1..126
DNA (126bp) protein (42aa)

This feature has no annotations

ar4r2_scaffold_852_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(345..2375)
DNA (2031bp) protein (677aa)
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CHB4_9GAMM rbh
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit {ECO:0000313|EMBL:EIJ43007.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
ar4r2_scaffold_852_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3058..3294
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000367E5C6
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ar4r2_scaffold_852_4
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3307..4392
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00038221BC rbh
Universal stress protein {ECO:0000313|EMBL:EDN70465.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
universal stress protein
ar4r2_scaffold_852_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4416..6233
DNA (1818bp) protein (606aa)
Sulfate permease family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BXN7_9GAMM rbh
sulfate permease family protein
Sulfate permease family protein {ECO:0000313|EMBL:BAP54745.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_852_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6556..9147)
DNA (2592bp) protein (864aa)
ATP-dependent chaperone ClpB n=1 Tax=Beggiatoa alba B18LD RepID=I3CCI9_9GAMM rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ATP-dependent chaperone ClpB
ar4r2_scaffold_852_7
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9348..10556)
DNA (1209bp) protein (403aa)
General secretion pathway protein F n=1 Tax=Beggiatoa alba B18LD RepID=I3CIT3_9GAMM rbh
General secretion pathway protein F {ECO:0000313|EMBL:EIJ43526.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
general secretion pathway protein F
ar4r2_scaffold_852_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10665..11420)
DNA (756bp) protein (252aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Beggiatoa sp. PS RepID=A7BRG4_9GAMM rbh
pyridoxal phosphate biosynthetic protein pdxJ
ar4r2_scaffold_852_9
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11481..12659)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVZ1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN69291.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ar4r2_scaffold_852_10
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13078..14796
DNA (1719bp) protein (573aa)
Thiol:disulfide interchange protein DsbD n=1 Tax=Beggiatoa sp. PS RepID=A7BVH8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD12225.1}; Flags: Fragment;; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
cytochrome c biogenesis protein transmembrane region rbh
ar4r2_scaffold_852_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15653..17848
DNA (2196bp) protein (732aa)
General secretion pathway protein D n=1 Tax=Beggiatoa alba B18LD RepID=I3CIA0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD06206.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
general secretion pathway protein D
ar4r2_scaffold_852_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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17879..18877
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000345A134
glucokinase
Glucokinase {ECO:0000313|EMBL:BAP54481.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_852_13
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19029..19931)
DNA (903bp) protein (301aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Ornithine carbamoyltransferase n=1 Tax=Beggiatoa sp. PS RepID=A7C4T9_9GAMM rbh
ornithine carbamoyltransferase
ar4r2_scaffold_852_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19944..21128)
DNA (1185bp) protein (395aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Acetylornithine aminotransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDJ3_9GAMM rbh
acetylornithine aminotransferase
ar4r2_scaffold_852_15
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21410..22696)
DNA (1287bp) protein (429aa)
NADH dehydrogenase {ECO:0000313|EMBL:KHD11376.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KHD11376.1};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
NADH-quinone oxidoreductase, F subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CGL4_9GAMM rbh
NADH-quinone oxidoreductase subunit F
ar4r2_scaffold_852_16
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22741..23247)
DNA (507bp) protein (169aa)
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BYT4_9GAMM
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:EDN68305.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
NADH-quinone oxidoreductase subunit E
ar4r2_scaffold_852_17
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23514..24431)
DNA (918bp) protein (306aa)
Transposase, IS605 OrfB family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWT0_NITHN
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADE13811.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Displaying 17 items

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