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ar4r2_scaffold_524

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_524_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25..612)
DNA (588bp) protein (196aa)
transposase IS605
Transposase IS605 {ECO:0000313|EMBL:BAP54457.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_2
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

717..3908
DNA (3192bp) protein (1064aa)
Acriflavin resistance protein n=2 Tax=Nitrosococcus oceani RepID=Q3J715_NITOC rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ABA59381.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
acriflavin resistance protein rbh
ar4r2_scaffold_524_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4062..6068)
DNA (2007bp) protein (669aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
Ribonuclease E n=1 Tax=Beggiatoa alba B18LD RepID=I3CJD6_9GAMM rbh
ribonuclease, Rne/Rng family
ar4r2_scaffold_524_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7600..12921
DNA (5322bp) protein (1774aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Putative ATPase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WX78_9NOST rbh
putative ATPase
ar4r2_scaffold_524_5
unknown

Not on your lists

comp(13026..13229)
DNA (204bp) protein (68aa)

This feature has no annotations

ar4r2_scaffold_524_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13171..13815)
DNA (645bp) protein (215aa)
V-type proton ATPase subunit E n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXK4_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KHD12541.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
H(+)transporting two-sector ATPase E subunit
ar4r2_scaffold_524_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13819..14130)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXK3_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55518.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_8
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14127..14576)
DNA (450bp) protein (150aa)
ATPase subunit C n=1 Tax=Beggiatoa sp. PS RepID=A7BT11_9GAMM
ATPase subunit C {ECO:0000313|EMBL:EDN70320.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
ATPase subunit C
ar4r2_scaffold_524_9
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14599..16809)
DNA (2211bp) protein (737aa)
TonB-dependent receptor n=2 Tax=Nitrosococcus oceani RepID=Q3JBM6_NITOC rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD04965.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
TonB-dependent receptor rbh
ar4r2_scaffold_524_10
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16832..17425)
DNA (594bp) protein (198aa)
Transmembrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4J5_9GAMM
Transmembrane protein {ECO:0000313|EMBL:EDN66289.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_524_11
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17679..18182
DNA (504bp) protein (168aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Probable thiol peroxidase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8N0_ANADF
redoxin domain-containing protein
ar4r2_scaffold_524_12
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18223..19215)
DNA (993bp) protein (331aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
tRNA-dihydrouridine synthase n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WTJ3_METML rbh
tRNA dihydrouridine synthase B
ar4r2_scaffold_524_13
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19233..19547)
DNA (315bp) protein (105aa)
TPR repeat protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVS6_9GAMM
TPR repeat protein {ECO:0000313|EMBL:EDN69356.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
TPR repeat-containing protein
ar4r2_scaffold_524_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19637..20719)
DNA (1083bp) protein (361aa)
Histidine kinase,Response regulator receiver domain protein,histidine kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CL41_9GAMM rbh
histidine kinase
Histidine kinase {ECO:0000313|EMBL:BAP55216.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_15
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20976..22907)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QMV1_9RHOB
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:BAP56812.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_16
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23097..23504
DNA (408bp) protein (136aa)
ADP-ribose pyrophosphatase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDH5_9GAMM
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:BAP55158.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23602..23901
DNA (300bp) protein (100aa)
YCII-related domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYJ4_9GAMM
YCII-related domain protein
YCII-related domain protein {ECO:0000313|EMBL:BAP56402.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_18
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23980..25452)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1FXL1_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT11554.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein rbh
ar4r2_scaffold_524_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25473..27041)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CL20_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57724.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_20
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27301..28842
DNA (1542bp) protein (514aa)
Putative phosphoesterase n=1 Tax=Beggiatoa alba B18LD RepID=I3CL19_9GAMM rbh
Putative phosphoesterase {ECO:0000313|EMBL:EIJ44312.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
putative phosphoesterase
ar4r2_scaffold_524_21
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28941..29468
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026282F1
Heme-binding protein {ECO:0000313|EMBL:EJI84725.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
hypothetical protein
ar4r2_scaffold_524_22
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29580..30059
DNA (480bp) protein (160aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJU7_9GAMM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIJ43890.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
ar4r2_scaffold_524_23
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30076..30555
DNA (480bp) protein (160aa)
Type IV pilus modification protein PilV n=1 Tax=Beggiatoa alba B18LD RepID=I3CJU6_9GAMM
type IV pilus modification protein PilV
Type IV pilus modification protein PilV {ECO:0000313|EMBL:BAP57564.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_524_24
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30552..31697
DNA (1146bp) protein (382aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJU5_9GAMM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIJ43888.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
type IV pilus assembly protein PilW
ar4r2_scaffold_524_25
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31719..32327
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJU4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ43887.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_524_26
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32492..35797
DNA (3306bp) protein (1102aa)
Type IV pilin biogenesis protein n=1 Tax=Beggiatoa sp. PS RepID=A7BT37_9GAMM
type IV pilin biogenesis protein
Type IV pilin biogenesis protein {ECO:0000313|EMBL:BAP57567.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Displaying 26 items

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