ggKbase home page

ar4r2_scaffold_564_15

Organism: ALUMROCK_MS4_Beggiotoa_37_524_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(21252..22970)

Top 3 Functional Annotations

Value Algorithm Source
LysM repeat-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CDR1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 514.0
  • Bit_score: 360
  • Evalue 2.80e-96
  • rbh
LysM repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 441.0
  • Bit_score: 385
  • Evalue 1.70e-104
LysM repeat-containing protein {ECO:0000313|EMBL:BAP55237.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 441.0
  • Bit_score: 385
  • Evalue 8.60e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thioploca ingrica → Thioploca → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGCATAATTCTATTAGGGTAATGATCACTCAGATCACTGTATTTCTCATCATCTTGATGGGTTTAATAGGTTTATCCGGTTGTAGTACGATGGATGCCAAACCAACTCACGACGCATTAAGTAATGATGACACTGTGGTTTATAAGAATGGTTATCAAGCAGCCGAACTAGACTATTTTTTTAACTTGATTAAAGACAATGTACCTTCATTAGCAACCTTATCTAGTCTGCCTGGACAGATATCACCAATTACTTTCAAAGAGTTCAAAGTCAAAAGTGAATATCCTGACTTATGGCATCGAATTGCACAGGGGTATAGCCTAGAATATGATGAAGATAATCCGAAGATTCAGGCGGCTATTAAACGATTTTCTAAGTACACTCGATATTTTGATATTATTTCTATTAAAGCCCGTCCTTACCTATTCCACATTGTAGAAGAAGCAGAAAAACGAGGTATTCCTTTAGAACTCGCTCTCTTACCTGCAATCGAAAGTTCCTTTGATCCCTCAGCTCTTTCCTCACGTAGCGCGGCGGGTTTGTGGCAATTCACGCCAGGTACGGGCAAAAATTTCGGTTTAGCACGTAACAAATGGTATGACGGCAGACGTGATGTTGTAGCCTCTACGACAGCGGCTTTAGATTATTTAGAAAAATTACATAACTTTTTTGATGGCGATTGGTTGTTAGCGATTGGTGCTTATAACTACGGTGAAGGCAATATGCAAAAAGCTATGGAAAGAAATGAAGCGGCTGGTAAACCCACTGACTTTTGGTCATTAAGCTTACCCACTGAAACTACTGAATTTGTACCTAGTTTAATTGCCGTCTCAAAAATCGTTGCTAATCCGGAAAAATATGGAGTTACCCTTAATGTCATTGAGGACGAGCCTTATCTCACTCAAGTGGTGTTAAATGAGCCAATCAGCTTATCTGTAGCTGCTAAATTAGCAGATTTGCCTATGTCTGATTTTAAACGCCTCAATCCTGGCTATCGCAGTTCAACAACGGGTCCTTATGGTCCACACTGTATCACCTTACCTATCAGTAAAGCTAAAGAATTTGAACAAGCAGTAGCCAGCTTGACGCCCGATGAATATTTGTCTAATGAAATGATTGCAGTAGCTGATGATATCGAAGAAGATGCACCTAAAGTCAGCCAACGTAAATCAATCGCACAAGTTAATACTAAAGCAGAAGCCAATGTTAAAACAGCAGGTTATAGAGTAAATCGAGGCGATACTTTAAATAAAATTGCGCAACGTTATGGCACATCCACCAAAGCATTACGCAAATTAAATGGCATGAAAAGTAACTATCTTAAAGTAGGACAAACCATTCAAGTGCCCAGTACAGGTACACAAAATGCTGGTAGCACCCAAGTTGCAAATAATGCTAAAAAACATGTCGTGAAGAAAGGCGACACACTGGCACAAATTGCCAAACGTTATAATACCAGTGTCTCAACTTTACGTCGCTTGAATGGAGTACGTGGAGATCAAATCCATGTGGGGCAATCACTCAAAGTTTCTGGTAATAATACCAGTACAACTAATGATAAGACAAAAGTGGTACACACTGTGAAATCGGGTGACAGCTTATGGACAATTGCACGTGATTACCAAGTCAGTGTAGATAAAATCAGTCAATGGAATAAATTACAAAAACGAGAAGCATTGCGTTTAGGACAAGAACTGACTATTTGGAAAGACAGTTGA
PROTEIN sequence
Length: 573
MHNSIRVMITQITVFLIILMGLIGLSGCSTMDAKPTHDALSNDDTVVYKNGYQAAELDYFFNLIKDNVPSLATLSSLPGQISPITFKEFKVKSEYPDLWHRIAQGYSLEYDEDNPKIQAAIKRFSKYTRYFDIISIKARPYLFHIVEEAEKRGIPLELALLPAIESSFDPSALSSRSAAGLWQFTPGTGKNFGLARNKWYDGRRDVVASTTAALDYLEKLHNFFDGDWLLAIGAYNYGEGNMQKAMERNEAAGKPTDFWSLSLPTETTEFVPSLIAVSKIVANPEKYGVTLNVIEDEPYLTQVVLNEPISLSVAAKLADLPMSDFKRLNPGYRSSTTGPYGPHCITLPISKAKEFEQAVASLTPDEYLSNEMIAVADDIEEDAPKVSQRKSIAQVNTKAEANVKTAGYRVNRGDTLNKIAQRYGTSTKALRKLNGMKSNYLKVGQTIQVPSTGTQNAGSTQVANNAKKHVVKKGDTLAQIAKRYNTSVSTLRRLNGVRGDQIHVGQSLKVSGNNTSTTNDKTKVVHTVKSGDSLWTIARDYQVSVDKISQWNKLQKREALRLGQELTIWKDS*