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ar4r2_scaffold_564

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_564_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..436)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CET4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42127.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_564_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436..1017)
DNA (582bp) protein (194aa)
hypothetical protein n=2 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000380841C
Uncharacterized protein {ECO:0000313|EMBL:EIJ42334.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_564_3
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1503..2042)
DNA (540bp) protein (180aa)
CBS domain containing protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNM4_9GAMM
CBS domain containing protein {ECO:0000313|EMBL:EAR22823.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
putative signal-transduction protein containing cAMP-binding and CBS domains
ar4r2_scaffold_564_4
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2589..4130)
DNA (1542bp) protein (514aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ATP synthase subunit alpha n=1 Tax=Beggiatoa alba B18LD RepID=I3CK15_9GAMM rbh
F0F1 ATP synthase subunit alpha
ar4r2_scaffold_564_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4232..4765)
DNA (534bp) protein (178aa)
ATP synthase subunit delta n=1 Tax=Beggiatoa sp. PS RepID=A7BRB3_9GAMM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ATPase, F1 complex, OSCP/delta subunit
ar4r2_scaffold_564_6
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4775..5245)
DNA (471bp) protein (157aa)
ATP synthase subunit b n=1 Tax=Beggiatoa alba B18LD RepID=I3CK17_9GAMM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ATP synthase F0 subunit B
ar4r2_scaffold_564_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5315..5611)
DNA (297bp) protein (99aa)
ATP synthase F0, gamma subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BRB5_9GAMM
ATP synthase F0 subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_8
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5713..6525)
DNA (813bp) protein (271aa)
ATP synthase subunit a n=1 Tax=Beggiatoa alba B18LD RepID=I3CK19_9GAMM rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ATP synthase F0 subunit A
ar4r2_scaffold_564_9
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6572..6958)
DNA (387bp) protein (129aa)
Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7BRB8_9GAMM
Membrane protein {ECO:0000313|EMBL:EDN70924.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
membrane protein
ar4r2_scaffold_564_10
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7472..8080)
DNA (609bp) protein (203aa)
Peptidase C60, sortase A and B n=1 Tax=Beggiatoa sp. SS RepID=A7BLN3_9GAMM
peptidase C60, sortase A and B
Peptidase C60, sortase A and B {ECO:0000313|EMBL:BAP56702.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8716..9816
DNA (1101bp) protein (367aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Beggiatoa alba B18LD RepID=I3CJK7_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56282.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9859..10416
DNA (558bp) protein (186aa)
Chemotaxis signal transduction protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJK6_9GAMM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EIJ43799.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
chemotaxis signal transduction protein
ar4r2_scaffold_564_13
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10448..12994
DNA (2547bp) protein (849aa)
Methyl-accepting chemotaxis protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJK5_9GAMM rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:BAP56284.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_14
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13126..21117
DNA (7992bp) protein (2664aa)
Chemotaxis protein histidine kinase-like protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJK4_9GAMM rbh
chemotaxis protein histidine kinase-like protein
Chemotaxis protein histidine kinase-like protein {ECO:0000313|EMBL:BAP56285.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_15
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21252..22970)
DNA (1719bp) protein (573aa)
LysM repeat-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CDR1_9GAMM rbh
LysM repeat-containing protein
LysM repeat-containing protein {ECO:0000313|EMBL:BAP55237.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_16
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23178..24044)
DNA (867bp) protein (289aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Beggiatoa sp. PS RepID=A7C462_9GAMM rbh
phosphatidylserine decarboxylase
ar4r2_scaffold_564_17
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24295..28191)
DNA (3897bp) protein (1299aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CEU2_9GAMM rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:BAP57273.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_18
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28557..29444)
DNA (888bp) protein (296aa)
Periplasmic ATP/GTP-binding protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T325_9GAMM
putative periplasmic ATP/GTP-binding protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ar4r2_scaffold_564_19
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29635..30330)
DNA (696bp) protein (232aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJD3_9GAMM
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EGG92997.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
alpha/beta hydrolase
ar4r2_scaffold_564_20
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30327..30797)
DNA (471bp) protein (157aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Cytosine/adenosine deaminase n=1 Tax=Beggiatoa sp. PS RepID=A7C6G6_9GAMM
cytosine/adenosine deaminase
ar4r2_scaffold_564_21
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30804..31493)
DNA (690bp) protein (230aa)
Uncharacterized membrane protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CHL1_9GAMM
uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:BAP54711.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_564_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31777..32232)
DNA (456bp) protein (152aa)
Transposase {ECO:0000313|EMBL:KHD10272.1}; Flags: Fragment;; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
transposase IS605
Displaying 22 items

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