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ar4r2_scaffold_296_7

Organism: ALUMROCK_MS4_Beggiotoa_37_524_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 5648..7510

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ74_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 625.0
  • Bit_score: 897
  • Evalue 6.80e-258
  • rbh
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 626.0
  • Bit_score: 899
  • Evalue 3.90e-259
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 626.0
  • Bit_score: 899
  • Evalue 1.90e-258

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Taxonomy

Thioploca ingrica → Thioploca → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
ATGAACCAAGAACACCAAACATCACAACTAAAATTACTCATTGCAAGAGGCAAAGAACAGGGTTATTTGACGTATCACGAAATTAACGATCATTTGCCGGATGATATTGTCGATCCTGAACAAATTGACACTATTATCAATATGATTAATGATATGGGCATCTCTGTGCACGAATTTGCCCCTGATGCTGACAGTTTATTGATTGCTGATGCGGTTGCACCTGACGATGATGTGGCAGAAGAAGCTGTTGCAGCACTTGCCACTGTCGATAGTGAATTTGGGCGCACCACTGATCCTGTTCGTATGTATATGCGTGAAATGGGCACTGTCGATTTACTCACTCGCGAAGGTGAAATCAAAATCGCTAAACGCATTGAAGAAGGACTCAGCCAAACTTTAAGTGCATTATCTACTCATCCTGATATTATTTACGAATTTTTAAAAATGTATGATTTGGTCGGTTCTGAAGAGATCAAATTATCCGATTTAATTAATGGTTTTAAAGACCCATCTGAAATAGAAGAAATTACCGAAGAGTTTGACGCAGACGATTTAACTTTAGATGCAAATGCTGCCCTAGACGATGACGATAGTCTAGTAGAAATAGTTGCTGATGACGAAGATGAAGATGAAGCAGCTATCTTAGAAGAAAGTATACTAGACCCTGAAGAAACCCAAGCGCGCTTTAACCAATTACATGAAAAATATACCCACTTAATAGAAGTAAAAAATAAATATGGGGTTGGTAGCACAGAATACGAACAACAACGCAAAGAAGTAGCGAACTGCTTTTTACAGTTTAAATTAGTACCTAAATTAATTGAAGATTTATCAGAAAAACTCAGAGTGGCTGTAGCTGGCATTCGTGAGAACGAAAACAAAATTCGTGACATTTGTATTAGAAAAGTGGGTATGGATAAAAATGACTTCCTTAATTCATTTAAGAACAATATTACCAACCCCAATTGGATTAACTCATTATTAGAAAGTGGCAAATCATATACGAATTCCTTAAAACGACACCAAGCTGAATTACAAAGTGTACAAAACTTTCTGATTGAACAAGAAAAAAGGGCTTGTTTGGCATTAAGTGAAATCAAAGAAATCAATCGTCACATGTCGATTGGCGAAGCCAAAGCAAGACGCGCTAAAAAAGAAATGATTGAAGCAAACTTGCGTTTAGTGATTTCGATTGCCAAAAAATATACCAATCGTGGTTTACAATTTCTTGATCTGATTCAAGAAGGTAACATTGGTTTGATGAAAGCCGTAGATAAATTTGAATATCGTCGTGGTTATAAATTTTCCACATATGCCACTTGGTGGATTCGACAAGCGATTACCCGCTCAATTGCTGATCAAGCACGTACCATTCGTATTCCCGTGCACATGATTGAAACAATTAATAAACTAAATCGGGTTTCCCGTCAAATTTTACAAGAAAAAGGTCGTGAAGCTACGCCTGAAGAATTGGCTGATCGTATGGAAATGCCAGAAGACAAAGTACGGAAAGTACTTAAAATTGCTAAAGAACCTATTTCAATGGAAACACCCATTGGCGATGACGAAGAATCCCATTTAGGTGATTTTATTGAAGATACTTCAATTCCTGCCCCTTTGGAATCAGCAATGTTTGAGGGATTACGTCGTGCTACACAAGAAATGTTACACAGTTTAACGCCACGAGAAGCTAAAGTGTTACGTATGCGTTTTGGCATTGATATGCACACTGATCATACATTGGAAGAAGTCGGTCGTCAGTTTGATGTTACTCGAGAACGTATTAGGCAAATTGAAGCTAAAGCATTACGTAAATTAAGGCATCCCAGTCGTTCTGAGTTATTACGTAGTTTCCTAGACTAA
PROTEIN sequence
Length: 621
MNQEHQTSQLKLLIARGKEQGYLTYHEINDHLPDDIVDPEQIDTIINMINDMGISVHEFAPDADSLLIADAVAPDDDVAEEAVAALATVDSEFGRTTDPVRMYMREMGTVDLLTREGEIKIAKRIEEGLSQTLSALSTHPDIIYEFLKMYDLVGSEEIKLSDLINGFKDPSEIEEITEEFDADDLTLDANAALDDDDSLVEIVADDEDEDEAAILEESILDPEETQARFNQLHEKYTHLIEVKNKYGVGSTEYEQQRKEVANCFLQFKLVPKLIEDLSEKLRVAVAGIRENENKIRDICIRKVGMDKNDFLNSFKNNITNPNWINSLLESGKSYTNSLKRHQAELQSVQNFLIEQEKRACLALSEIKEINRHMSIGEAKARRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRQILQEKGREATPEELADRMEMPEDKVRKVLKIAKEPISMETPIGDDEESHLGDFIEDTSIPAPLESAMFEGLRRATQEMLHSLTPREAKVLRMRFGIDMHTDHTLEEVGRQFDVTRERIRQIEAKALRKLRHPSRSELLRSFLD*