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ar4r2_scaffold_296

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_296_1
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..446)
DNA (444bp) protein (148aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Beggiatoa alba B18LD RepID=I3CCF3_9GAMM
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase
ar4r2_scaffold_296_2
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

741..1379
DNA (639bp) protein (213aa)
Putative lipase n=1 Tax=uncultured microorganism RepID=F8V182_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
ar4r2_scaffold_296_3
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1593..1841
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5FCCE
hypothetical protein
Tax=CG_Maritim_01
ar4r2_scaffold_296_4
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2003..2740
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11NV0_CYTH3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE97087.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
ABC transporter rbh
ar4r2_scaffold_296_5
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2845..4605
DNA (1761bp) protein (587aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
DNA primase n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ73_9GAMM rbh
DNA primase
ar4r2_scaffold_296_6
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4664..5488
DNA (825bp) protein (275aa)
Uncharacterized protein (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V3I7_9AQUI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55978.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_296_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5648..7510
DNA (1863bp) protein (621aa)
RNA polymerase sigma factor RpoD n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ74_9GAMM rbh
RNA polymerase sigma 70
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_296_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7886..8734
DNA (849bp) protein (283aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Beggiatoa alba B18LD RepID=I3CD37_9GAMM
protein involved in catabolism of external DNA
ar4r2_scaffold_296_9
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8765..9841)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCE5_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP57202.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_296_10
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10267..11511)
DNA (1245bp) protein (415aa)
Molybdopterin biosynthesis protein MoeA n=1 Tax=Beggiatoa sp. PS RepID=A7BY30_9GAMM rbh
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:EDN68556.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
molybdopterin biosynthesis protein MoeA
ar4r2_scaffold_296_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11599..11961)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFS7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42470.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
ar4r2_scaffold_296_12
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12139..12960
DNA (822bp) protein (274aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CD22_9GAMM rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase rbh
ar4r2_scaffold_296_13
Neisseria weaveri, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13155..13463
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Neisseria weaveri LMG 5135 RepID=G2DI90_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EGV38920.1}; TaxID=1051985 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria weaveri LMG 5135.;"
hypothetical protein
ar4r2_scaffold_296_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13466..13678
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD11822.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ar4r2_scaffold_296_15
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13696..14763
DNA (1068bp) protein (356aa)
Glycosyl transferase, family 2 n=1 Tax=Beggiatoa sp. PS RepID=A7BW23_9GAMM rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EDN69262.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
glycosyl transferase, family 2
ar4r2_scaffold_296_16
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

14767..15717
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Eimeria necatrix RepID=U6MSM8_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ67212.1}; TaxID=51315 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria necatrix.;"
ar4r2_scaffold_296_17
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15723..16295
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036F6C1C
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44645.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
ar4r2_scaffold_296_18
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16328..17680
DNA (1353bp) protein (451aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
RIP metalloprotease RseP n=1 Tax=Beggiatoa alba B18LD RepID=I3CKE2_9GAMM rbh
RIP metalloprotease RseP
ar4r2_scaffold_296_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18903
DNA (1221bp) protein (407aa)
Hydroxypyruvate reductase n=1 Tax=Beggiatoa sp. PS RepID=A7BX18_9GAMM rbh
hydroxypyruvate reductase
Hydroxypyruvate reductase {ECO:0000313|EMBL:BAP56572.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_296_20
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19147..21780
DNA (2634bp) protein (878aa)
Subtilisin-like serine protease n=1 Tax=Beggiatoa alba B18LD RepID=I3CD99_9GAMM rbh
Subtilisin-like serine protease {ECO:0000313|EMBL:EIJ41592.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
serine protease
ar4r2_scaffold_296_21
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21826..22263)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CG59_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42602.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ar4r2_scaffold_296_22
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22345..24543)
DNA (2199bp) protein (733aa)
LPS-assembly protein LptD n=1 Tax=Beggiatoa alba B18LD RepID=I3CCK7_9GAMM rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
organic solvent tolerance protein OstA
ar4r2_scaffold_296_23
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24567..25223)
DNA (657bp) protein (219aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CDD6_9GAMM rbh
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KHD08262.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ar4r2_scaffold_296_24
Vibrio sp. 16, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25247..26398)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Vibrio sp. 16 RepID=B8K8R0_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EED26766.1}; TaxID=391586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. 16.;"
hypothetical protein
ar4r2_scaffold_296_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26429..27505)
DNA (1077bp) protein (359aa)
Sugar acetylase n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2UX07_PSEST
sugar acetylase
Sugar acetylase {ECO:0000313|EMBL:AHL73652.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
ar4r2_scaffold_296_26
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27807..28076
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQY2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN71048.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar4r2_scaffold_296_27
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28073..28378
DNA (306bp) protein (102aa)
Protein containing DUF710 n=1 Tax=Beggiatoa sp. PS RepID=A7BQY3_9GAMM
cell division protein ZapA
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar4r2_scaffold_296_28
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28593..29546)
DNA (954bp) protein (318aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Beggiatoa alba B18LD RepID=I3CHJ3_9GAMM rbh
ATPase AAA {ECO:0000313|EMBL:KHD11634.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ATPase AAA
ar4r2_scaffold_296_29
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29730..31778
DNA (2049bp) protein (683aa)
TonB-dependent receptor n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DG10_9GAMM rbh
TonB-dependent copper receptor {ECO:0000313|EMBL:EGV50439.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
TonB-dependent copper receptor rbh
ar4r2_scaffold_296_30
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31963..33192)
DNA (1230bp) protein (410aa)
Secreted protein n=1 Tax=Beggiatoa sp. PS RepID=A7C0S6_9GAMM rbh
Secreted protein {ECO:0000313|EMBL:EDN67608.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
Displaying items 1-30 of 92 in total

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