ggKbase home page

ar4r2_scaffold_462_29

Organism: ALUMROCK_MS4_Beggiotoa_37_524_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 33577..34245

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilO n=1 Tax=Beggiatoa alba B18LD RepID=I3CH34_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 204.0
  • Bit_score: 235
  • Evalue 5.20e-59
type IV pilus assembly protein PilO similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 229.0
  • Bit_score: 250
  • Evalue 2.60e-64
Type IV pilus assembly protein PilO {ECO:0000313|EMBL:BAP58227.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 229.0
  • Bit_score: 250
  • Evalue 1.30e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thioploca ingrica → Thioploca → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGAAGCTTGATGATTTTAAGAATCTTGATCCAAATAATGTAGGTAATTGGCCAATACCAGTCAAAGCTGTGGTGATTGCTTGTTTATGTGCAGCAGCATTAGGCGCAGGTTACTACTTTGACACCCAAAATCAACTCTCTGAATTATCTGTTGCTGAGAAAAAAGAACATGAGCTATTAGAAACCTTTAGGACCAAACATTGGAAAGCTTCCACCTTAGATAAATTAAAAGAGCAATTAGCAGAAGTCGAAAGATCATTGGGAGAGTTACAAAAACAATTACCCAGTGAAGCAGAAGTGGCAGGTCTTATCCAAGATATTTCTCAATCAGCTATTGCAAGTGGTCTAAAATCTGAATTGTTTAAACCAGATAAAGAAGTTAATGATGAAAAAGGGGTATATGTTAAATATCCTATTTCGCTGAGATTAAGTGGAGAATATCATGCATTTGGGCGTTTCGTCAGTAGTATTGCTGCTATGCCACGTATTGTGACTCAGCATGATATTAATATCAAATCAGCAACAAAATCTGGAACCTCTAATAGTAGTGAAGATAAGTATGAATTAACTATGGAAATGACCGCGCAAATTTACCGCTATTTGGAAGAGTCACCCACAGAAGAAAAAGATAAAAAAACAGAAGACAAAAAAGAAACTGCAAAAAAATAA
PROTEIN sequence
Length: 223
MKLDDFKNLDPNNVGNWPIPVKAVVIACLCAAALGAGYYFDTQNQLSELSVAEKKEHELLETFRTKHWKASTLDKLKEQLAEVERSLGELQKQLPSEAEVAGLIQDISQSAIASGLKSELFKPDKEVNDEKGVYVKYPISLRLSGEYHAFGRFVSSIAAMPRIVTQHDINIKSATKSGTSNSSEDKYELTMEMTAQIYRYLEESPTEEKDKKTEDKKETAKK*