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ar4r2_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_257_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(579..869)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 3; EC=3.1.-.-;; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
CRISPR-associated endoribonuclease Cas2 3 n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=CAS2C_NITEU
hypothetical protein
ar4r2_scaffold_257_2
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(876..1910)
DNA (1035bp) protein (345aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
CRISPR-associated protein Cas1 n=1 Tax=Thiobacillus thioparus RepID=UPI0003809A16 rbh
CRISPR-associated protein Cas1 rbh
ar4r2_scaffold_257_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1958..2278
DNA (321bp) protein (107aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ3_HALNC
DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ACX95666.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_257_4
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2275..2634
DNA (360bp) protein (120aa)
mRNA interferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXV5_9BACT
MazF family transcriptional regulator
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
ar4r2_scaffold_257_5

Not on your lists

comp(2636..3256)
DNA (621bp) protein (207aa)
CRISPR-associated protein Cas4 n=1 Tax=Thiobacillus thioparus RepID=UPI00035E64F1 rbh
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:CBH96438.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated protein Cas4 rbh
ar4r2_scaffold_257_6

Not on your lists

comp(3260..3502)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PND5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH96437.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
predicted periplasmic or secreted lipoprotein
ar4r2_scaffold_257_7

Not on your lists

comp(3499..3705)
DNA (207bp) protein (69aa)
2-oxoisovalerate dehydrogenase, E1 component beta subunit n=1 Tax=mine drainage metagenome RepID=E6PND4_9ZZZZ
2-oxoisovalerate dehydrogenase, E1 component beta subunit {ECO:0000313|EMBL:CBH96436.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
ar4r2_scaffold_257_8

Not on your lists

comp(3717..4679)
DNA (963bp) protein (321aa)
CRISPR-associated protein, Csd2 family protein n=1 Tax=mine drainage metagenome RepID=E6PND3_9ZZZZ rbh
CRISPR-associated protein, Csd2 family protein {ECO:0000313|EMBL:CBH96435.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
uncharacterized protein predicted to be involved in DNA repair
ar4r2_scaffold_257_9

Not on your lists

comp(4679..6439)
DNA (1761bp) protein (587aa)
CRISPR-associated protein, Csd1 family protein n=1 Tax=mine drainage metagenome RepID=E6PND2_9ZZZZ rbh
CRISPR-associated protein, Csd1 family protein {ECO:0000313|EMBL:CBH96434.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated protein Csd1 family rbh
ar4r2_scaffold_257_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6460..7101)
DNA (642bp) protein (214aa)
CRISPR-associated protein Cas5 family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ8_HALNC rbh
CRISPR-associated protein Cas5 family rbh
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:ACX95671.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_257_11
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7122..7550)
DNA (429bp) protein (143aa)
PIN domain protein id=2069369 bin=GWE2_Gallionellales_58_10 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
PilT domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
ar4r2_scaffold_257_12

Not on your lists

comp(7540..7830)
DNA (291bp) protein (97aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T0ZTP3_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EQD48063.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
toxin-antitoxin (TA) system antitoxin
ar4r2_scaffold_257_13

Not on your lists

comp(7880..10165)
DNA (2286bp) protein (762aa)
CRISPR-associated helicase Cas3 n=1 Tax=mine drainage metagenome RepID=E6PND0_9ZZZZ rbh
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CBH96432.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated helicase Cas3 rbh
ar4r2_scaffold_257_14
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10329..11291)
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CI4_METCA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAU90662.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
ar4r2_scaffold_257_15
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11278..11802)
DNA (525bp) protein (175aa)
Protein tyrosine phosphatase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSQ5_SIDLE
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ADE11991.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
ar4r2_scaffold_257_16
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(11813..13462)
DNA (1650bp) protein (550aa)
glucose-6-phosphate isomerase (EC:5.3.1.9) rbh
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
glucose-6-phosphate isomerase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035E4DC6 rbh
ar4r2_scaffold_257_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13885..15396)
DNA (1512bp) protein (504aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) rbh
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
glucose 6-phosphate dehydrogenase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035CA52C rbh
ar4r2_scaffold_257_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15403..16326)
DNA (924bp) protein (308aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZG0_HALNC rbh
6-phosphogluconate dehydrogenase rbh
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:ACX95833.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_257_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16809..19727
DNA (2919bp) protein (973aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31) rbh
Phosphoenolpyruvate carboxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAH1_9PROT rbh
ar4r2_scaffold_257_20
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19732..20094
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI000381F6AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC70621.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
ar4r2_scaffold_257_21
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20091..20852
DNA (762bp) protein (254aa)
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Methylomonas sp. MK1 RepID=UPI000363B94A rbh
ubiquinone/menaquinone biosynthesis methyltransferase ubiE rbh
Tax=BJP_IG2158_Methylococcales_50_91
ar4r2_scaffold_257_22
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20849..21463
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J8P4_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA58802.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
ar4r2_scaffold_257_23
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21460..23028
DNA (1569bp) protein (523aa)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ubiquinone biosynthesis protein UbiB n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037CC7C3 rbh
2-polyprenylphenol 6-hydroxylase rbh
ar4r2_scaffold_257_24
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

23085..24755
DNA (1671bp) protein (557aa)
abortive phage resistance protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B562AD rbh
abortive infection phage resistance protein rbh
Possible abortive infection phage resistance protein {ECO:0000313|EMBL:ABB28034.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
ar4r2_scaffold_257_25
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24792..25358)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B1Q1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ16733.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
ar4r2_scaffold_257_26

Not on your lists

comp(25627..27018)
DNA (1392bp) protein (464aa)
4-alpha-glucanotransferase (EC:2.4.1.25) rbh
4-alpha-glucanotransferase (Amylomaltase) n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YGX0_METFJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN27112.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ar4r2_scaffold_257_27
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27144..28874)
DNA (1731bp) protein (577aa)
glycoside hydrolase n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036B748F rbh
glycoside hydrolase, family 57
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_257_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29086..30357)
DNA (1272bp) protein (424aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYV2_HALNC rbh
glucose-1-phosphate adenylyltransferase rbh
ar4r2_scaffold_257_29
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30524..32695
DNA (2172bp) protein (724aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
glycogen branching protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036BF34F rbh
glycogen branching protein rbh
ar4r2_scaffold_257_30
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33042..34535
DNA (1494bp) protein (498aa)
glgA; glycogen synthase (EC:2.4.1.21) rbh
Glycogen synthase 1 {ECO:0000255|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000255|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase 1 {ECO:0000255|HAMAP-Rule:MF_00484}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
glycogen synthase n=1 Tax=Methylococcus capsulatus RepID=UPI00030B24D7 rbh
Displaying items 1-30 of 44 in total

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