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ar4r2_scaffold_1088

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1088_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(262..795)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000368DE65
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ar4r2_scaffold_1088_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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1443..4505
DNA (3063bp) protein (1021aa)
putative spermidine synthase with an N-terminal membrane domain
Spermine synthase id=1837380 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ar4r2_scaffold_1088_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4676..5443
DNA (768bp) protein (256aa)
UPI0003D3CEF7 related cluster n=1 Tax=unknown RepID=UPI0003D3CEF7
Uncharacterized protein {ECO:0000313|EMBL:GAD22883.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
FimB
ar4r2_scaffold_1088_4
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5447..6715)
DNA (1269bp) protein (423aa)
chemotaxis protein CheY n=1 Tax=Azoarcus toluclasticus RepID=UPI00035EB89B rbh
Type 4 fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:EGW54745.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
two-component response regulator PilR rbh
ar4r2_scaffold_1088_5
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6788..7435)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z5U3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89887.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
ar4r2_scaffold_1088_6
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7573..9195)
DNA (1623bp) protein (541aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
ATP-binding region ATPase domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWD1_NITHN
ATP-binding region ATPase domain-containing protein
ar4r2_scaffold_1088_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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9434..10603
DNA (1170bp) protein (390aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5) rbh
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTC9_ALLVD rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_1088_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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10605..11495
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GN40_THISH rbh
succinyl-CoA synthetase subunit alpha rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_1088_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11492..13096
DNA (1605bp) protein (535aa)
NAD+ synthetase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YE12_THIV6 rbh
NAD+ synthetase rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_1088_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13215..14273)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361B766
Uncharacterized protein {ECO:0000313|EMBL:EKE76443.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
heat shock protein
ar4r2_scaffold_1088_11
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14325..17177)
DNA (2853bp) protein (951aa)
UvrABC system protein A n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BA23_9GAMM rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
excinuclease ABC subunit A rbh
ar4r2_scaffold_1088_12
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17281..17790
DNA (510bp) protein (170aa)
Single-stranded DNA-binding protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JLX2_9GAMM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
single-stranded DNA-binding protein
ar4r2_scaffold_1088_13
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17876..18787)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB77_NITMU rbh
RuBisCO operon transcriptional regulator {ECO:0000313|EMBL:KFZ89073.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
LysR family transcriptional regulator rbh
ar4r2_scaffold_1088_14
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19014..19820
DNA (807bp) protein (269aa)
cbbL; ribulose bisophosphate carboxylase (EC:4.1.1.39) rbh
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Ribulose bisphosphate carboxylase large chain 2 id=1268668 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Displaying 14 items

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