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ar4r2_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_337_1
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(731..2377)
DNA (1647bp) protein (549aa)
NERD domain-containing protein n=1 Tax=Thauera sp. 28 RepID=N6YNH0_9RHOO rbh
Nuclease-related domain protein {ECO:0000313|EMBL:KIN89736.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
NERD domain-containing protein rbh
ar4r2_scaffold_337_2
Pseudomonas poae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2661..3068)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Pseudomonas poae RE*1-1-14 RepID=M4K2W0_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE27458.1}; TaxID=1282356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas poae RE*1-1-14.;"
ar4r2_scaffold_337_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3080..3667)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U116_ALCXX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH82928.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
ar4r2_scaffold_337_4
Pseudomonas poae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3664..6834)
DNA (3171bp) protein (1057aa)
ATP-binding protein n=1 Tax=Pseudomonas poae RE*1-1-14 RepID=M4K9T9_9PSED rbh
ATP-binding protein rbh
ATP-binding protein {ECO:0000313|EMBL:AGE27460.1}; TaxID=1282356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas poae RE*1-1-14.;"
ar4r2_scaffold_337_5
Pseudomonas sp. WCS358, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6841..7728)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI0003074724
Uncharacterized protein {ECO:0000313|EMBL:KEY88851.1}; TaxID=1495066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. WCS358.;"
hypothetical protein
ar4r2_scaffold_337_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..10000)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7A4R0_PSEST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFN79599.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
ar4r2_scaffold_337_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9993..10988)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7ADK0_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN79598.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri DSM 10701.;"
ar4r2_scaffold_337_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11041..12264)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W479_ACISJ
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
ar4r2_scaffold_337_9
unknown

Not on your lists

comp(12309..12923)
DNA (615bp) protein (205aa)

This feature has no annotations

ar4r2_scaffold_337_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13396..13782)
DNA (387bp) protein (129aa)
Phage DNA repair protein n=3 Tax=Enterobacteriaceae RepID=R8WMY6_9ENTR
DNA repair protein {ECO:0000313|EMBL:ETX68635.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
DNA repair protein RadC
ar4r2_scaffold_337_11
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13925..14377)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G692_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT08429.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein
ar4r2_scaffold_337_12
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14741..15604)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003630E04 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14914.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein rbh
ar4r2_scaffold_337_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15607..18360)
DNA (2754bp) protein (918aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBT7_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM43712.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
ar4r2_scaffold_337_14
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18360..18986)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJV9_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14916.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein rbh
ar4r2_scaffold_337_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18983..20242)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A1WBT9_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM43714.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
ar4r2_scaffold_337_16
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21324..22295
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXY1_NITHN
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_337_17
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22346..23482
DNA (1137bp) protein (379aa)
CRISPR-associated protein, NE0113 family n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RW26_ALLVD rbh
CRISPR-associated protein, NE0113 family rbh
CRISPR-associated protein, NE0113 family {ECO:0000313|EMBL:ADC64038.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
ar4r2_scaffold_337_18
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23479..24495
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI00036C3111
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_337_19
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24492..27563
DNA (3072bp) protein (1024aa)
CRISPR-associated protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z5_9GAMM rbh
CRISPR-associated family protein {ECO:0000313|EMBL:KIN91512.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
CRISPR-associated RAMP Crm2 family protein rbh
ar4r2_scaffold_337_20
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27560..28723
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI00036988C5 rbh
CRISPR-associated Cmr3 family protein rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_337_21
unknown

Not on your lists

28737..28859
DNA (123bp) protein (41aa)

This feature has no annotations

ar4r2_scaffold_337_22
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28852..29763
DNA (912bp) protein (304aa)
CRISPR type III-B/RAMP module RAMP protein Cmr4 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z1_9GAMM rbh
CRISPR-associated RAMP Cmr4 family protein family protein rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_337_23
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29763..30125
DNA (363bp) protein (121aa)
CRISPR-associated protein Cmr5 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4BDC5
CRISPR-associated family protein {ECO:0000313|EMBL:KIN91396.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
CRISPR-associated Cmr5 family protein
ar4r2_scaffold_337_24
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30128..31513
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B49EC2 rbh
Cmr6 family CRISPR-associated RAMP protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_337_25
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31590..31931)
DNA (342bp) protein (114aa)
plasmid stabilization protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037D10F7
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
ar4r2_scaffold_337_26
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31931..32206)
DNA (276bp) protein (92aa)
Prevent-host-death protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZRR4_9RHOO
prevent-host-death family protein
Prevent-host-death protein {ECO:0000313|EMBL:EPZ16207.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
ar4r2_scaffold_337_27
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32560..32802
DNA (243bp) protein (81aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GV53_9GAMM
AbrB family DNA-binding protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
ar4r2_scaffold_337_28
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32795..33193
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
Ribonuclease VapC n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GR05_9GAMM
hypothetical protein
ar4r2_scaffold_337_29
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33240..33620
DNA (381bp) protein (127aa)
DNA-binding protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JQM9_9GAMM
DNA-binding protein {ECO:0000313|EMBL:ESQ16934.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
hypothetical protein
ar4r2_scaffold_337_30
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33661..34887
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALgr3 RepID=UPI000368291B rbh
CRISPR-associated protein rbh
CRISPR-associated protein, TM1812 family {ECO:0000313|EMBL:AFL76318.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
Displaying items 1-30 of 40 in total

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