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ar4r2_scaffold_839

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_839_1
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..522)
DNA (522bp) protein (174aa)
Transposase ISRme5 (Copy b, CMGI-2) n=2 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNW1_RALME
tnpA; transposase ISRme5 (copy b, CMGI-2)
Transposase ISRme5 (Copy c) {ECO:0000313|EMBL:ABF08186.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
ar4r2_scaffold_839_trna_2
unknown

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comp(732..815)
DNA (84bp)
transferRNA Leu
ar4r2_scaffold_839_trna_1
unknown

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comp(834..904)
DNA (71bp)
transferRNA Cys
ar4r2_scaffold_839_2
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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1096..4989
DNA (3894bp) protein (1298aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNE0_9GAMM rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_839_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5075..6037
DNA (963bp) protein (321aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZU8_HALNC rbh
acetyl-CoA carboxylase, carboxyl transferase subunit alpha rbh
ar4r2_scaffold_839_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6200..7552
DNA (1353bp) protein (451aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
tRNA(Ile)-lysidine synthetase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000371FF62 rbh
tRNA(Ile)-lysidine synthetase rbh
ar4r2_scaffold_839_5
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7692..10250
DNA (2559bp) protein (853aa)
alpha-glucan phosphorylase (EC:2.4.1.1) rbh
Alpha-glucan phosphorylase {ECO:0000313|EMBL:ABI56309.1}; EC=2.4.1.1 {ECO:0000313|EMBL:ABI56309.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Alpha-glucan phosphorylase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AA28_ALKEH rbh
ar4r2_scaffold_839_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10251..11174)
DNA (924bp) protein (308aa)
Histone deacetylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1W2_HALNC rbh
histone deacetylase rbh
Histone deacetylase {ECO:0000313|EMBL:ACX96685.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_839_7
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11214..12290)
DNA (1077bp) protein (359aa)
iron ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361E804 rbh
transport system ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ar4r2_scaffold_839_8
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12376..14001
DNA (1626bp) protein (542aa)
Iron (III) transport system permease n=1 Tax=Azoarcus sp. KH32C RepID=H0PTF6_9RHOO rbh
fbpB; iron (III) transport system permease rbh
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
ar4r2_scaffold_839_9
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14174..14548)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B42724
Uncharacterized protein {ECO:0000313|EMBL:ADY29355.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
ar4r2_scaffold_839_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14563..15978)
DNA (1416bp) protein (472aa)
PhoH family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYH1_HALNC rbh
PhoH family protein rbh
PhoH family protein {ECO:0000313|EMBL:ACX95494.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_839_11
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15988..16476)
DNA (489bp) protein (163aa)
Thiol peroxidase, Bcp-type {ECO:0000313|EMBL:KDE38401.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KDE38401.1};; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
peroxiredoxin n=1 Tax=Pseudomonas thermotolerans RepID=UPI00035DE1D7
alkyl hydroperoxide reductase
ar4r2_scaffold_839_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16488..17015)
DNA (528bp) protein (176aa)
Amino acid-binding ACT domain protein n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4G7_9GAMM
Glycine cleavage system transcriptional antiactivator GcvR {ECO:0000313|EMBL:CDH43692.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
amino acid-binding ACT domain-containing protein
ar4r2_scaffold_839_13
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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17498..18388
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DF35_9GAMM rbh
dihydrodipicolinate synthase
ar4r2_scaffold_839_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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18432..19553
DNA (1122bp) protein (374aa)
Uncharacterized lipoprotein-like protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYK7_HALNC
lipoprotein
Uncharacterized lipoprotein-like protein {ECO:0000313|EMBL:ACX95530.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_839_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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19722..20414
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYT3_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95606.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar4r2_scaffold_839_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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20411..21094
DNA (684bp) protein (228aa)
Putative ABC transporter-binding protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDV3_9GAMM
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ar4r2_scaffold_839_17
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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21091..21927
DNA (837bp) protein (279aa)
ABC transporter, ATP-binding protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDV2_9GAMM rbh
conserved hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_839_18
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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21921..22700
DNA (780bp) protein (260aa)
ABC transporter, permease protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T0Q6_META2 rbh
ABC transporter permease rbh
Tax=RBG_16_Gammaproteobacteria_57_12_curated
ar4r2_scaffold_839_19
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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22897..23370
DNA (474bp) protein (158aa)
Putative signal peptide protein, toluene tolerance Ttg2C-like n=1 Tax=Azoarcus sp. KH32C RepID=H0PX93_9RHOO
ttg2C; putative signal peptide protein, toluene tolerance Ttg2C-like
Putative signal peptide protein, toluene tolerance Ttg2C-like {ECO:0000313|EMBL:BAL23085.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
ar4r2_scaffold_839_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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23384..24769
DNA (1386bp) protein (462aa)
Outer membrane efflux protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYT8_HALNC rbh
outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ACX95611.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 22 items

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